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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2EFX

The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine amide

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006508	biological_process	proteolysis
A	0008233	molecular_function	peptidase activity
B	0006508	biological_process	proteolysis
B	0008233	molecular_function	peptidase activity
C	0006508	biological_process	proteolysis
C	0008233	molecular_function	peptidase activity
D	0006508	biological_process	proteolysis
D	0008233	molecular_function	peptidase activity
E	0006508	biological_process	proteolysis
E	0008233	molecular_function	peptidase activity
F	0006508	biological_process	proteolysis
F	0008233	molecular_function	peptidase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE BA A 3003

Chain	Residue
A	SER121
A	ASP122
A	GLU232
A	TRP233
A	HOH3045

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE BA A 3004

Chain	Residue
A	GLU211
A	HOH3195
D	ASP53
D	HOH3211

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE BA A 3008

Chain	Residue
A	SER301
A	GLU323
A	HOH3087
B	GLU323
B	BA3009

site_id	AC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE BA A 3017

Chain	Residue
A	ASN360
A	SER363
B	SER363

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE BA B 3002

Chain	Residue
B	SER121
B	ASP122
B	GLU232
B	TRP233
B	HOH3088
B	HOH3130

site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE BA B 3007

Chain	Residue
A	HOH3217
B	BA3009

site_id	AC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE BA B 3009

Chain	Residue
A	BA3008
B	SER301
B	GLU323
B	BA3007

site_id	AC8
Number of Residues	8
Details	BINDING SITE FOR RESIDUE BA C 3001

Chain	Residue
C	SER121
C	ASP122
C	GLU232
C	TRP233
C	HOH3035
C	HOH3093
C	HOH3118
C	HOH3221

site_id	AC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE BA C 3005

Chain	Residue
B	HOH3067
C	ALA206

site_id	BC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE BA C 3010

Chain	Residue
C	SER301
C	GLU323
C	HOH3174
C	HOH3219

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE BA C 3012

Chain	Residue
C	HOH3174
E	BA3019

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE BA D 3013

Chain	Residue
C	HOH3219
D	SER301
D	GLU323
E	BA3011
E	BA3019

site_id	BC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE BA D 3015

Chain	Residue
D	ASN286
D	HOH3210

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE BA D 3016

Chain	Residue
D	ASP122
D	GLU232
D	HOH3219

site_id	BC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE BA D 3020

Chain	Residue
D	ASN360
D	SER363

site_id	BC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE BA E 3011

Chain	Residue
C	HOH3219
D	BA3013
E	SER301
E	GLU323
E	BA3019
E	HOH3123

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE BA E 3014

Chain	Residue
E	ASP122
E	GLU232
E	HOH3052
E	HOH3114

site_id	BC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE BA E 3019

Chain	Residue
C	BA3012
C	HOH3174
D	SER301
D	BA3013
E	GLU323
E	BA3011

site_id	CC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE BA F 3018

Chain	Residue
C	ASP76

site_id	CC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE BA F 3022

Chain	Residue
F	PHE342

site_id	CC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE NFA A 2001

Chain	Residue
A	ALA59
A	SER60
A	GLU114
A	ASN151
A	PHE234
A	ALA239
A	GLY309
A	GLN310
A	HOH3047

site_id	CC4
Number of Residues	10
Details	BINDING SITE FOR RESIDUE NFA B 2002

Chain	Residue
B	ALA59
B	SER60
B	PHE113
B	GLU114
B	ASN151
B	PHE234
B	PHE282
B	GLY309
B	GLN310
B	HOH3090

site_id	CC5
Number of Residues	11
Details	BINDING SITE FOR RESIDUE NFA C 2003

Chain	Residue
C	PHE234
C	ALA239
C	PHE282
C	GLY309
C	GLN310
C	HOH3192
C	ALA59
C	SER60
C	PHE113
C	GLU114
C	ASN151

site_id	CC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE NFA D 2004

Chain	Residue
D	GLU114
D	ASN151
D	PHE234
D	GLN310
D	PRO312
D	HOH3082
D	HOH3129

site_id	CC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NFA E 2005

Chain	Residue
E	MET119
E	ASN151
E	GLN310
E	ILE311
E	PRO312
E	HOH3158

site_id	CC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NFA F 2006

Chain	Residue
F	GLU114
F	MET119
F	GLN310
F	ILE311
F	PRO312

Catalytic Information from CSA

site_id	CSA1
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
A	SER60
A	ASN151
A	TYR149
A	LYS63
A	HIS307

site_id	CSA2
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
B	SER60
B	ASN151
B	TYR149
B	LYS63
B	HIS307

site_id	CSA3
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
C	SER60
C	ASN151
C	TYR149
C	LYS63
C	HIS307

site_id	CSA4
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
D	SER60
D	ASN151
D	TYR149
D	LYS63
D	HIS307

site_id	CSA5
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
E	SER60
E	ASN151
E	TYR149
E	LYS63
E	HIS307

site_id	CSA6
Number of Residues	5
Details	Annotated By Reference To The Literature 1ei5

Chain	Residue	Details
F	SER60
F	ASN151
F	TYR149
F	LYS63
F	HIS307

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