2DWC
Crystal structure of Probable phosphoribosylglycinamide formyl transferase from Pyrococcus horikoshii OT3 complexed with ADP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0004644 | molecular_function | phosphoribosylglycinamide formyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0006164 | biological_process | purine nucleotide biosynthetic process |
A | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
A | 0009152 | biological_process | purine ribonucleotide biosynthetic process |
A | 0016742 | molecular_function | hydroxymethyl-, formyl- and related transferase activity |
A | 0016874 | molecular_function | ligase activity |
A | 0043815 | molecular_function | phosphoribosylglycinamide formyltransferase 2 activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003824 | molecular_function | catalytic activity |
B | 0004644 | molecular_function | phosphoribosylglycinamide formyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0006164 | biological_process | purine nucleotide biosynthetic process |
B | 0006189 | biological_process | 'de novo' IMP biosynthetic process |
B | 0009152 | biological_process | purine ribonucleotide biosynthetic process |
B | 0016742 | molecular_function | hydroxymethyl-, formyl- and related transferase activity |
B | 0016874 | molecular_function | ligase activity |
B | 0043815 | molecular_function | phosphoribosylglycinamide formyltransferase 2 activity |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 601 |
Chain | Residue |
B | LYS378 |
B | TYR382 |
B | ARG385 |
B | HOH982 |
B | HOH1200 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 602 |
Chain | Residue |
A | ARG414 |
A | TRP420 |
A | HOH942 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 603 |
Chain | Residue |
B | TRP420 |
B | HOH904 |
B | HOH1004 |
B | ARG414 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 604 |
Chain | Residue |
A | LYS378 |
A | TYR382 |
A | ARG385 |
A | HOH1074 |
site_id | AC5 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE ADP A 501 |
Chain | Residue |
A | ARG121 |
A | HIS160 |
A | LYS162 |
A | GLU202 |
A | GLU203 |
A | HIS204 |
A | ILE205 |
A | PHE207 |
A | GLU210 |
A | GLN237 |
A | PHE281 |
A | ASN290 |
A | GLU291 |
site_id | AC6 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE ADP B 502 |
Chain | Residue |
B | ARG121 |
B | HIS160 |
B | LYS162 |
B | GLU202 |
B | GLU203 |
B | HIS204 |
B | ILE205 |
B | PHE207 |
B | GLU210 |
B | GLN237 |
B | PHE281 |
B | ASN290 |
B | GLU291 |
B | HOH1003 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 14 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01643 |
Chain | Residue | Details |
A | GLU29 | |
B | GLU279 | |
B | GLU291 | |
B | ASP298 | |
B | LYS378 | |
B | ARG385 | |
A | GLU89 | |
A | GLU279 | |
A | GLU291 | |
A | ASP298 | |
A | LYS378 | |
A | ARG385 | |
B | GLU29 | |
B | GLU89 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|Ref.3 |
Chain | Residue | Details |
A | ARG121 | |
A | LYS162 | |
A | GLU202 | |
A | GLU210 | |
B | ARG121 | |
B | LYS162 | |
B | GLU202 | |
B | GLU210 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1ez1 |
Chain | Residue | Details |
A | ASP298 | |
A | ARG385 | |
A | THR299 |
site_id | CSA2 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1ez1 |
Chain | Residue | Details |
B | ASP298 | |
B | ARG385 | |
B | THR299 |