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2DKF

Crystal Structure of TTHA0252 from Thermus thermophilus HB8, a RNA Degradation Protein of the Metallo-beta-lactamase Superfamily

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0003723molecular_functionRNA binding
B0004518molecular_functionnuclease activity
B0004519molecular_functionendonuclease activity
B0004521molecular_functionRNA endonuclease activity
B0005737cellular_componentcytoplasm
B0006364biological_processrRNA processing
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
C0003723molecular_functionRNA binding
C0004518molecular_functionnuclease activity
C0004519molecular_functionendonuclease activity
C0004521molecular_functionRNA endonuclease activity
C0005737cellular_componentcytoplasm
C0006364biological_processrRNA processing
C0016787molecular_functionhydrolase activity
C0046872molecular_functionmetal ion binding
D0003723molecular_functionRNA binding
D0004518molecular_functionnuclease activity
D0004519molecular_functionendonuclease activity
D0004521molecular_functionRNA endonuclease activity
D0005737cellular_componentcytoplasm
D0006364biological_processrRNA processing
D0016787molecular_functionhydrolase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 432
ChainResidue
AASP63
AHIS64
AASP162
AHIS400
AZN433

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 433
ChainResidue
AZN432
AHIS59
AHIS61
AHIS141
AASP162

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 432
ChainResidue
BASP63
BHIS64
BASP162
BHIS400
BZN433

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 433
ChainResidue
BHIS59
BHIS61
BHIS141
BASP162
BZN432

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN C 432
ChainResidue
CHIS59
CHIS61
CHIS141
CASP162
CZN433

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN C 433
ChainResidue
CASP63
CHIS64
CASP162
CHIS400
CZN432

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN D 432
ChainResidue
DASP63
DHIS64
DASP162
DHIS400
DZN433

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN D 433
ChainResidue
DHIS59
DHIS61
DHIS141
DASP162
DZN432

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1qh5
ChainResidueDetails
AASP63

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1qh5
ChainResidueDetails
BASP63

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1qh5
ChainResidueDetails
CASP63

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1qh5
ChainResidueDetails
DASP63

243531

PDB entries from 2025-10-22

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