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2D7C

Crystal structure of human Rab11 in complex with FIP3 Rab-binding domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
ASER25
ATHR43
AGTP1001
AHOH1031
AHOH1036

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1102
ChainResidue
BHOH1139
BSER25
BTHR43
BGTP1101
BHOH1138

site_idAC3
Number of Residues30
DetailsBINDING SITE FOR RESIDUE GTP A 1001
ChainResidue
ASER20
AGLY21
AVAL22
AGLY23
ALYS24
ASER25
AASN26
APHE36
AASN37
ALEU38
ASER40
ASER42
ATHR43
AALA68
AGLY69
AASN124
ALYS125
AASP127
ALEU128
ASER154
AALA155
ALEU156
AMG1002
AHOH1019
AHOH1021
AHOH1028
AHOH1029
AHOH1031
AHOH1036
AHOH1150

site_idAC4
Number of Residues30
DetailsBINDING SITE FOR RESIDUE GTP B 1101
ChainResidue
BSER20
BGLY21
BVAL22
BGLY23
BLYS24
BSER25
BASN26
BPHE36
BASN37
BLEU38
BSER40
BSER42
BTHR43
BALA68
BGLY69
BLEU70
BASN124
BLYS125
BASP127
BLEU128
BSER154
BALA155
BLEU156
BMG1102
BHOH1124
BHOH1125
BHOH1138
BHOH1139
BHOH1154
BHOH1155

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MES A 1
ChainResidue
AGLU103
ALYS107
AASN146
BARG132
BALA133
BVAL134
BPRO135
BTHR136
BHOH1218

Functional Information from PROSITE/UniProt
site_idPS00675
Number of Residues14
DetailsSIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. VVLiGDSGVGKsnL
ChainResidueDetails
AVAL14-LEU27

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:2D7C, ECO:0007744|PDB:2GZD, ECO:0007744|PDB:2GZH
ChainResidueDetails
AGLY21
BGLY21

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17007872, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:2D7C, ECO:0007744|PDB:2GZD, ECO:0007744|PDB:2GZH, ECO:0007744|PDB:2HV8
ChainResidueDetails
AVAL22
ALEU128
ALEU156
AASP157
BVAL22
BLYS24
BSER25
BLEU27
BLEU38
BGLU39
BLYS41
ALYS24
BLEU70
BSER126
BLEU128
BLEU156
BASP157
ASER25
ALEU27
ALEU38
AGLU39
ALYS41
ALEU70
ASER126

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0007744|PDB:2GZH
ChainResidueDetails
AGLY23
BGLY23

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15837192, ECO:0000269|PubMed:16034420, ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17007872, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:1OIX, ECO:0007744|PDB:1YZK, ECO:0007744|PDB:2D7C, ECO:0007744|PDB:2GZD, ECO:0007744|PDB:2GZH, ECO:0007744|PDB:2HV8
ChainResidueDetails
AASN26
AILE44
BASN26
BILE44

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17007872, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:2GZD, ECO:0007744|PDB:2GZH
ChainResidueDetails
ATHR43
BTHR43

site_idSWS_FT_FI6
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:2D7C, ECO:0007744|PDB:2GZD
ChainResidueDetails
ATHR67
BTHR67

site_idSWS_FT_FI7
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16905101, ECO:0000269|PubMed:17007872, ECO:0000269|PubMed:17030804, ECO:0007744|PDB:2D7C, ECO:0007744|PDB:2GZD, ECO:0007744|PDB:2GZH
ChainResidueDetails
ALYS125
BLYS125

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ALEU70

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BLEU70

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AGLY21

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BGLY21

237423

PDB entries from 2025-06-11

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