2CG1
AGAO in complex with wc11b (Ru-wire inhibitor, 11-carbon linker, data set b)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005507 | molecular_function | copper ion binding |
A | 0008131 | molecular_function | primary amine oxidase activity |
A | 0009308 | biological_process | amine metabolic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0048038 | molecular_function | quinone binding |
A | 0052595 | molecular_function | aliphatic amine oxidase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CU A1629 |
Chain | Residue |
A | HIS431 |
A | HIS433 |
A | HIS592 |
A | HOH2262 |
A | HOH2296 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA A1630 |
Chain | Residue |
A | HOH2301 |
A | ASP440 |
A | MET441 |
A | ASP581 |
A | ILE582 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 A1632 |
Chain | Residue |
A | ASP316 |
A | CYS317 |
A | LEU318 |
A | HIS345 |
A | GLY350 |
A | ARG367 |
A | HOH2264 |
A | HOH2454 |
A | HOH2455 |
site_id | AC4 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE 11R A1631 |
Chain | Residue |
A | PHE105 |
A | ALA135 |
A | PRO136 |
A | LEU137 |
A | TYR296 |
A | TYR302 |
A | TYR307 |
A | LEU358 |
A | GLY361 |
A | ASN363 |
A | THR378 |
A | GLY380 |
A | ASN381 |
A | TPQ382 |
site_id | AC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A1633 |
Chain | Residue |
A | ARG532 |
A | ARG533 |
A | THR554 |
A | PHE557 |
A | HIS561 |
A | SER562 |
A | GLY563 |
A | GLY564 |
A | ALA565 |
A | HOH2399 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A1634 |
Chain | Residue |
A | ASN126 |
A | ASP161 |
A | VAL197 |
A | ALA199 |
A | HOH2456 |
A | HOH2457 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A1635 |
Chain | Residue |
A | LEU590 |
A | ASP605 |
A | LYS610 |
A | HOH2458 |
A | HOH2459 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A1636 |
Chain | Residue |
A | ASP444 |
A | GLY445 |
A | PHE446 |
A | THR447 |
A | ASN499 |
Functional Information from PROSITE/UniProt
site_id | PS01164 |
Number of Residues | 14 |
Details | COPPER_AMINE_OXID_1 Copper amine oxidase topaquinone signature. MVIsfftTigNYDY |
Chain | Residue | Details |
A | MET371-TYR384 |
site_id | PS01165 |
Number of Residues | 14 |
Details | COPPER_AMINE_OXID_2 Copper amine oxidase copper-binding site signature. TfGltHFprvEDwP |
Chain | Residue | Details |
A | THR587-PRO600 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: Proton acceptor => ECO:0000250|UniProtKB:P12807 |
Chain | Residue | Details |
A | ASP298 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | ACT_SITE: Schiff-base intermediate with substrate; via topaquinone => ECO:0000250|UniProtKB:P12807 |
Chain | Residue | Details |
A | TPQ382 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000250|UniProtKB:P12807 |
Chain | Residue | Details |
A | TYR296 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000250|UniProtKB:P46883 |
Chain | Residue | Details |
A | ILE379 |
Chain | Residue | Details |
A | HIS431 | |
A | HIS433 | |
A | HIS592 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | MOD_RES: 2',4',5'-topaquinone => ECO:0000269|PubMed:9405045 |
Chain | Residue | Details |
A | TPQ382 |