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2C3C

2.01 Angstrom X-ray crystal structure of a mixed disulfide between coenzyme M and NADPH-dependent oxidoreductase 2-ketopropyl coenzyme M carboxylase

Functional Information from GO Data
ChainGOidnamespacecontents
A0016491molecular_functionoxidoreductase activity
A0042208biological_processpropylene catabolic process
A0050628molecular_function2-oxopropyl-CoM reductase (carboxylating) activity
B0016491molecular_functionoxidoreductase activity
B0042208biological_processpropylene catabolic process
B0050628molecular_function2-oxopropyl-CoM reductase (carboxylating) activity
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE COM A1000
ChainResidue
AALA53
AHOH2088
BACN1525
AARG56
APHE57
AGLY79
ACYS82
APRO83
AMET140
AMET361
AARG365

site_idAC2
Number of Residues37
DetailsBINDING SITE FOR RESIDUE FAD A1524
ChainResidue
AGLY50
AGLY52
AALA53
AALA54
AASP73
AARG74
ATRP75
AGLY80
ASER81
AALA86
ACYS87
AHIS90
AHIS91
APRO157
AALA158
AALA181
AVAL182
AGLY183
AHIS202
ATYR229
AGLY352
AASP353
AMET359
AGLU360
AMET361
AALA364
ANAP1526
AHOH2050
AHOH2055
AHOH2102
AHOH2252
AHOH2253
AHOH2258
AHOH2364
AHOH2365
AHOH2366
BPHE501

site_idAC3
Number of Residues22
DetailsBINDING SITE FOR RESIDUE NAP A1526
ChainResidue
ALEU189
AGLY222
ASER223
ALYS224
ATHR225
AGLU228
AARG245
ATHR246
ALYS250
ALEU312
AGLY313
AMET359
AGLU360
AFAD1524
AHOH2368
AHOH2369
AHOH2370
AHOH2371
AHOH2372
AHOH2373
AHOH2374
AHOH2375

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE COM B1000
ChainResidue
AACN1525
AHOH2367
BALA53
BARG56
BPHE57
BGLY79
BCYS82
BPRO83
BMET140
BMET361
BARG365

site_idAC5
Number of Residues35
DetailsBINDING SITE FOR RESIDUE FAD B1524
ChainResidue
BVAL182
BGLY183
BHIS202
BTYR229
BGLY352
BASP353
BMET359
BGLU360
BMET361
BALA364
BNAP1526
BHOH2035
BHOH2326
BHOH2327
BHOH2328
BHOH2329
BHOH2330
APHE501
BGLY50
BGLY52
BALA53
BALA54
BVAL72
BASP73
BARG74
BTRP75
BGLY80
BSER81
BALA86
BCYS87
BHIS90
BHIS91
BPRO157
BALA158
BALA181

site_idAC6
Number of Residues24
DetailsBINDING SITE FOR RESIDUE NAP B1526
ChainResidue
BHIS90
BLEU189
BGLY222
BSER223
BLYS224
BTHR225
BGLU228
BARG245
BTHR246
BLYS250
BGLY311
BLEU312
BGLY313
BMET359
BGLU360
BPHE390
BFAD1524
BHOH2122
BHOH2187
BHOH2332
BHOH2333
BHOH2334
BHOH2335
BHOH2336

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACN A1525
ChainResidue
APHE501
AHIS506
AGLN509
AHOH2367
BARG365
BCOM1000

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACN B1525
ChainResidue
AARG365
ACOM1000
AHOH2088
BLEU431
BPHE501
BHIS506
BGLN509
BHOH2331

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:12390015, ECO:0000269|PubMed:16388586, ECO:0000269|PubMed:21192936, ECO:0007744|PDB:1MO9, ECO:0007744|PDB:1MOK, ECO:0007744|PDB:2C3C, ECO:0007744|PDB:2C3D, ECO:0007744|PDB:3Q6J
ChainResidueDetails
AALA53
BASP353
BMET361
BPHE501
ASER81
AALA158
AASP353
AMET361
APHE501
BALA53
BSER81
BALA158

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:12390015, ECO:0000269|PubMed:21192936, ECO:0000305|PubMed:16388586, ECO:0007744|PDB:1MO9, ECO:0007744|PDB:3Q6J
ChainResidueDetails
AARG56
AARG365
BARG56
BARG365

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:21192936, ECO:0000305|PubMed:16388586, ECO:0007744|PDB:3Q6J
ChainResidueDetails
ACYS82
BCYS82

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16388586, ECO:0000269|PubMed:21192936, ECO:0007744|PDB:2C3C, ECO:0007744|PDB:3Q6J
ChainResidueDetails
AGLY222
AARG245
AGLU360
BGLY222
BARG245
BGLU360

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
ACYS87
ACYS82

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
BCYS87
BCYS82

site_idCSA3
Number of Residues5
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
ACYS87
AHIS137
ACYS82
ALEU78
APHE501

site_idCSA4
Number of Residues5
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
BCYS87
BHIS137
BCYS82
BLEU78
BPHE501

site_idMCSA1
Number of Residues5
DetailsM-CSA 378
ChainResidueDetails
ALEU78electrostatic stabiliser, modifies pKa
ACYS82covalent catalysis
ACYS87covalent catalysis
AHIS137modifies pKa
APHE501electrostatic stabiliser

site_idMCSA2
Number of Residues5
DetailsM-CSA 378
ChainResidueDetails
BLEU78electrostatic stabiliser, modifies pKa
BCYS82covalent catalysis
BCYS87covalent catalysis
BHIS137modifies pKa
BPHE501electrostatic stabiliser

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PDB entries from 2024-08-07

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