2C31
CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH THE COFACTOR DERIVATIVE THIAMIN-2-THIAZOLONE DIPHOSPHATE AND ADENOSINE DIPHOSPHATE
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0008949 | molecular_function | oxalyl-CoA decarboxylase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0019752 | biological_process | carboxylic acid metabolic process |
A | 0030976 | molecular_function | thiamine pyrophosphate binding |
A | 0033611 | biological_process | oxalate catabolic process |
A | 0042802 | molecular_function | identical protein binding |
A | 0043531 | molecular_function | ADP binding |
A | 0046872 | molecular_function | metal ion binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003824 | molecular_function | catalytic activity |
B | 0008949 | molecular_function | oxalyl-CoA decarboxylase activity |
B | 0016831 | molecular_function | carboxy-lyase activity |
B | 0019752 | biological_process | carboxylic acid metabolic process |
B | 0030976 | molecular_function | thiamine pyrophosphate binding |
B | 0033611 | biological_process | oxalate catabolic process |
B | 0042802 | molecular_function | identical protein binding |
B | 0043531 | molecular_function | ADP binding |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A1553 |
Chain | Residue |
A | ASP452 |
A | ASN479 |
A | GLY481 |
A | TZD1554 |
A | HOH2353 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B1553 |
Chain | Residue |
B | HOH2262 |
B | ASP452 |
B | ASN479 |
B | GLY481 |
B | TZD1554 |
site_id | AC3 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE TZD A1554 |
Chain | Residue |
A | TYR377 |
A | GLY400 |
A | ALA401 |
A | ASN402 |
A | ALA403 |
A | GLY426 |
A | MET428 |
A | GLY451 |
A | ASP452 |
A | SER453 |
A | ALA454 |
A | PHE457 |
A | ASN479 |
A | GLY481 |
A | ILE482 |
A | TYR483 |
A | MG1553 |
A | HOH2353 |
B | VAL32 |
B | GLU56 |
B | VAL79 |
B | ASN86 |
B | TYR120 |
B | GLU121 |
site_id | AC4 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE ADP A1555 |
Chain | Residue |
A | ARG160 |
A | GLY221 |
A | LYS222 |
A | GLY223 |
A | MET247 |
A | GLY280 |
A | ALA281 |
A | ARG282 |
A | LEU286 |
A | ASP306 |
A | ILE307 |
A | GLY324 |
A | ASP325 |
A | ILE326 |
A | HOH2208 |
A | HOH2354 |
A | HOH2355 |
A | HOH2356 |
site_id | AC5 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE TZD B1554 |
Chain | Residue |
A | VAL32 |
A | GLU56 |
A | VAL79 |
A | ASN86 |
A | TYR120 |
A | GLU121 |
B | TYR377 |
B | GLY400 |
B | ALA401 |
B | ASN402 |
B | ALA403 |
B | GLY426 |
B | MET428 |
B | GLY451 |
B | ASP452 |
B | SER453 |
B | ALA454 |
B | PHE457 |
B | ASN479 |
B | GLY481 |
B | ILE482 |
B | TYR483 |
B | MG1553 |
B | HOH2262 |
site_id | AC6 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE ADP B1555 |
Chain | Residue |
B | ARG160 |
B | GLY221 |
B | LYS222 |
B | GLY223 |
B | MET247 |
B | GLY280 |
B | ALA281 |
B | ARG282 |
B | LEU286 |
B | ASP306 |
B | ILE307 |
B | GLY324 |
B | ASP325 |
B | ILE326 |
B | HOH2299 |
B | HOH2300 |
B | HOH2301 |
B | HOH2302 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 16 |
Details | BINDING: |
Chain | Residue | Details |
A | ILE34 | |
B | TYR120 | |
B | ALA263 | |
B | ALA401 | |
B | ARG408 | |
B | GLY426 | |
B | SER453 | |
B | SER553 | |
A | TYR120 | |
A | ALA263 | |
A | ALA401 | |
A | ARG408 | |
A | GLY426 | |
A | SER453 | |
A | SER553 | |
B | ILE34 |
site_id | SWS_FT_FI2 |
Number of Residues | 20 |
Details | BINDING: BINDING => ECO:0000269|PubMed:16216870, ECO:0000269|PubMed:17637344 |
Chain | Residue | Details |
A | ARG160 | |
A | TYR483 | |
B | ARG160 | |
B | LYS222 | |
B | ARG282 | |
B | ASP306 | |
B | ILE326 | |
B | TYR377 | |
B | ASP452 | |
B | ASN479 | |
B | GLY481 | |
A | LYS222 | |
B | TYR483 | |
A | ARG282 | |
A | ASP306 | |
A | ILE326 | |
A | TYR377 | |
A | ASP452 | |
A | ASN479 | |
A | GLY481 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | ASN358 | |
B | ASN358 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dtw |
Chain | Residue | Details |
A | VAL551 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dtw |
Chain | Residue | Details |
B | VAL551 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dtw |
Chain | Residue | Details |
A | PRO547 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dtw |
Chain | Residue | Details |
B | PRO547 |