2BS9
Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus stearothermophilus
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
A | 0005975 | biological_process | carbohydrate metabolic process |
B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
B | 0005975 | biological_process | carbohydrate metabolic process |
C | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
C | 0005975 | biological_process | carbohydrate metabolic process |
D | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
D | 0005975 | biological_process | carbohydrate metabolic process |
E | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
E | 0005975 | biological_process | carbohydrate metabolic process |
F | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
F | 0005975 | biological_process | carbohydrate metabolic process |
G | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
G | 0005975 | biological_process | carbohydrate metabolic process |
H | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
H | 0005975 | biological_process | carbohydrate metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA A 1503 |
Chain | Residue |
A | ARG26 |
A | TRP117 |
A | GLU323 |
A | GLU324 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA C 1503 |
Chain | Residue |
C | ARG26 |
C | TRP117 |
C | GLU323 |
C | GLU324 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA D 1503 |
Chain | Residue |
D | TRP117 |
D | GLU323 |
D | HOH2119 |
D | ARG26 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA E 1503 |
Chain | Residue |
E | ARG26 |
E | LEU29 |
E | TRP117 |
E | GLU323 |
E | GLU324 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA F 1503 |
Chain | Residue |
F | ARG26 |
F | TRP117 |
F | GLU323 |
F | GLU324 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA G 1503 |
Chain | Residue |
G | ARG26 |
G | TRP117 |
G | GLU323 |
G | GLU324 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA H 1503 |
Chain | Residue |
H | ARG26 |
H | TRP117 |
H | GLU323 |
Functional Information from PROSITE/UniProt
site_id | PS01027 |
Number of Residues | 10 |
Details | GLYCOSYL_HYDROL_F39 Glycosyl hydrolases family 39 active site. WlFEvWNEPN |
Chain | Residue | Details |
A | TRP153-ASN162 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | ACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU10068 |
Chain | Residue | Details |
A | GLU160 | |
B | GLU160 | |
C | GLU160 | |
D | GLU160 | |
E | GLU160 | |
F | GLU160 | |
G | GLU160 | |
H | GLU160 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | ACT_SITE: Nucleophile => ECO:0000250 |
Chain | Residue | Details |
A | ASN280 | |
B | ASN280 | |
C | ASN280 | |
D | ASN280 | |
E | ASN280 | |
F | ASN280 | |
G | ASN280 | |
H | ASN280 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
A | GLU160 |
site_id | CSA10 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
B | GLU278 | |
B | ARG52 | |
B | GLU160 |
site_id | CSA11 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
C | GLU278 | |
C | ARG52 | |
C | GLU160 |
site_id | CSA12 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
D | GLU278 | |
D | ARG52 | |
D | GLU160 |
site_id | CSA13 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
E | GLU278 | |
E | ARG52 | |
E | GLU160 |
site_id | CSA14 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
F | GLU278 | |
F | ARG52 | |
F | GLU160 |
site_id | CSA15 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
G | GLU278 | |
G | ARG52 | |
G | GLU160 |
site_id | CSA16 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
H | GLU278 | |
H | ARG52 | |
H | GLU160 |
site_id | CSA17 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
A | TRP153 |
site_id | CSA18 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
B | TRP153 |
site_id | CSA19 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
C | TRP153 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
B | GLU160 |
site_id | CSA20 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
D | TRP153 |
site_id | CSA21 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
E | TRP153 |
site_id | CSA22 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
F | TRP153 |
site_id | CSA23 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
G | TRP153 |
site_id | CSA24 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
H | TRP153 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
C | GLU160 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
D | GLU160 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
E | GLU160 |
site_id | CSA6 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
F | GLU160 |
site_id | CSA7 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
G | GLU160 |
site_id | CSA8 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
H | GLU160 |
site_id | CSA9 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1pz3 |
Chain | Residue | Details |
A | GLU278 | |
A | ARG52 | |
A | GLU160 |