2BKQ
NEDD8 protease
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000338 | biological_process | protein deneddylation |
A | 0005515 | molecular_function | protein binding |
A | 0005829 | cellular_component | cytosol |
A | 0006508 | biological_process | proteolysis |
A | 0008234 | molecular_function | cysteine-type peptidase activity |
A | 0016579 | biological_process | protein deubiquitination |
A | 0019784 | molecular_function | deNEDDylase activity |
A | 0043687 | biological_process | post-translational protein modification |
B | 0000338 | biological_process | protein deneddylation |
B | 0005515 | molecular_function | protein binding |
B | 0005829 | cellular_component | cytosol |
B | 0006508 | biological_process | proteolysis |
B | 0008234 | molecular_function | cysteine-type peptidase activity |
B | 0016579 | biological_process | protein deubiquitination |
B | 0019784 | molecular_function | deNEDDylase activity |
B | 0043687 | biological_process | post-translational protein modification |
C | 0000338 | biological_process | protein deneddylation |
C | 0005515 | molecular_function | protein binding |
C | 0005829 | cellular_component | cytosol |
C | 0006508 | biological_process | proteolysis |
C | 0008234 | molecular_function | cysteine-type peptidase activity |
C | 0016579 | biological_process | protein deubiquitination |
C | 0019784 | molecular_function | deNEDDylase activity |
C | 0043687 | biological_process | post-translational protein modification |
D | 0000338 | biological_process | protein deneddylation |
D | 0005515 | molecular_function | protein binding |
D | 0005829 | cellular_component | cytosol |
D | 0006508 | biological_process | proteolysis |
D | 0008234 | molecular_function | cysteine-type peptidase activity |
D | 0016579 | biological_process | protein deubiquitination |
D | 0019784 | molecular_function | deNEDDylase activity |
D | 0043687 | biological_process | post-translational protein modification |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | ACT_SITE: |
Chain | Residue | Details |
A | HIS102 | |
A | ASP119 | |
B | HIS102 | |
B | ASP119 | |
C | HIS102 | |
C | ASP119 | |
D | HIS102 | |
D | ASP119 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | ACT_SITE: Nucleophile |
Chain | Residue | Details |
A | CYS163 | |
B | CYS163 | |
C | CYS163 | |
D | CYS163 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | MOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895 |
Chain | Residue | Details |
A | MET1 | |
B | MET1 | |
C | MET1 | |
D | MET1 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 2bkr |
Chain | Residue | Details |
A | TRP103 | |
A | HIS102 | |
A | ASP119 | |
A | TRP26 | |
A | CYS163 |
site_id | CSA2 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 2bkr |
Chain | Residue | Details |
B | TRP103 | |
B | HIS102 | |
B | ASP119 | |
B | TRP26 | |
B | CYS163 |
site_id | CSA3 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 2bkr |
Chain | Residue | Details |
C | TRP103 | |
C | HIS102 | |
C | ASP119 | |
C | TRP26 | |
C | CYS163 |
site_id | CSA4 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 2bkr |
Chain | Residue | Details |
D | TRP103 | |
D | HIS102 | |
D | ASP119 | |
D | TRP26 | |
D | CYS163 |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 820 |
Chain | Residue | Details |
A | TRP26 | electrostatic stabiliser |
A | HIS102 | proton acceptor, proton donor |
A | TRP103 | electrostatic stabiliser |
A | ASP119 | electrostatic stabiliser |
A | CYS163 | nucleofuge, nucleophile, proton acceptor, proton donor |
site_id | MCSA2 |
Number of Residues | 5 |
Details | M-CSA 820 |
Chain | Residue | Details |
B | TRP26 | electrostatic stabiliser |
B | HIS102 | proton acceptor, proton donor |
B | TRP103 | electrostatic stabiliser |
B | ASP119 | electrostatic stabiliser |
B | CYS163 | nucleofuge, nucleophile, proton acceptor, proton donor |
site_id | MCSA3 |
Number of Residues | 5 |
Details | M-CSA 820 |
Chain | Residue | Details |
C | TRP26 | electrostatic stabiliser |
C | HIS102 | proton acceptor, proton donor |
C | TRP103 | electrostatic stabiliser |
C | ASP119 | electrostatic stabiliser |
C | CYS163 | nucleofuge, nucleophile, proton acceptor, proton donor |
site_id | MCSA4 |
Number of Residues | 5 |
Details | M-CSA 820 |
Chain | Residue | Details |
D | TRP26 | electrostatic stabiliser |
D | HIS102 | proton acceptor, proton donor |
D | TRP103 | electrostatic stabiliser |
D | ASP119 | electrostatic stabiliser |
D | CYS163 | nucleofuge, nucleophile, proton acceptor, proton donor |