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2BFN

The crystal structure of the complex of the haloalkane dehalogenase LinB with the product of dehalogenation reaction 1,2-dichloropropane.

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0009636biological_processresponse to toxic substance
A0016787molecular_functionhydrolase activity
A0018786molecular_functionhaloalkane dehalogenase activity
A0042597cellular_componentperiplasmic space
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE D2P A1297
ChainResidue
AASP108
APRO144
APHE151
AALA247
AHIS272
AHOH2152
AHOH2337

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A1298
ChainResidue
APRO208
AHOH2337
AASN38
ATRP109

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A1299
ChainResidue
AHIS121
AGLN165
AASP166
AHOH2157
AHOH2207

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A1300
ChainResidue
AASP149
AGLN152
AHOH2185
AHOH2186
AHOH2273
AHOH2274

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A1301
ChainResidue
AHOH2019
AHOH2038
AHOH2039
AHOH2040

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AASP108

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AGLU132

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000305|PubMed:10100638, ECO:0000305|PubMed:12939138, ECO:0000305|PubMed:14744129
ChainResidueDetails
AHIS272

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:14744129
ChainResidueDetails
AASN38

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:14744129, ECO:0000269|PubMed:17259360, ECO:0007744|PDB:1MJ5, ECO:0007744|PDB:2BFN
ChainResidueDetails
ATRP109

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1cv2
ChainResidueDetails
AHIS272
ATRP109
AGLU132
AASP108

site_idMCSA1
Number of Residues5
DetailsM-CSA 467
ChainResidueDetails
AASN38electrostatic stabiliser
AASP108covalent catalysis
ATRP109electrostatic stabiliser
AGLU132activator, electrostatic stabiliser
AHIS272activator, electrostatic stabiliser, proton shuttle (general acid/base)

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PDB entries from 2024-08-21

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