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2BFK

Bacillus cereus metallo-beta-lactamase (BcII) Arg (121) Cys mutant. Solved at pH7 using 20mM ZnSO4 in buffer. 1mM DTT was used as a reducing agent

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
B0008270molecular_functionzinc ion binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE AZI A 1292
ChainResidue
AASN75

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1300
ChainResidue
AHIS116
AHIS118
AHIS196
AZN1301
AHOH2258
AHOH2259

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1301
ChainResidue
AHIS263
AGOL1295
AZN1300
AHOH2258
AASP120
ACYS221

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 1302
ChainResidue
ASER225
ATHR226
ASER227
AGLY264
AGLU265
AHOH2260
AHOH2261
AHOH2263

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE AZI B 1292
ChainResidue
BHIS196
BLYS224
BGLY232
BASN233
BGOL1297
BZN1300
BHOH2113
BHOH2177
BHOH2233

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 1299
ChainResidue
BHIS116
BHIS118
BHIS196
BZN1300
BHOH2113
BHOH2243

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN B 1300
ChainResidue
BASP120
BCYS221
BHIS263
BAZI1292
BZN1299
BHOH2177
BHOH2243

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 1301
ChainResidue
BVAL177
BLYS181
BLYS186
BARG252

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1302
ChainResidue
BSER225
BTHR226
BSER227
BGLY264
BGLU265
BHOH2246

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 1293
ChainResidue
ATHR33
ALYS103

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1294
ChainResidue
ALYS148
BGLU100
BARG107
BARG131
BHOH2091

site_idBC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1295
ChainResidue
AHIS196
ACYS221
ALYS224
AGLY232
AASN233
AHIS263
AZN1301
AHOH2183
AHOH2184
AHOH2259

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1296
ChainResidue
AALA117
AHIS118
AALA119
AASN149
ATYR167

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1297
ChainResidue
AASP88
AASP89
ALYS90
AHOH2062

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 1298
ChainResidue
AASN215
AHOH2255

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1299
ChainResidue
AASN184
ALYS186
AGLN210
AHOH2257

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1303
ChainResidue
BGLN47
BLYS50
BLYS103
BHOH2039

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1304
ChainResidue
AGOL1305
BGLU100
BGLN105
BARG107

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 1305
ChainResidue
AGOL1304
BARG107

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 1293
ChainResidue
BASN215
BARG254
BASN255
BHOH2234

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 1294
ChainResidue
BHIS118
BALA119
BTYR167
BHOH2238

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 1295
ChainResidue
BASP88
BASP89
BLYS90
BHOH2117
BHOH2239

site_idCC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 1296
ChainResidue
BTHR56
BASN70
BGLY264
BGLU265
BHOH2022
BHOH2217
BHOH2241

site_idCC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 1297
ChainResidue
BLYS224
BASP230
BLEU231
BGLY232
BAZI1292
BHOH2233

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 1298
ChainResidue
BSER77
BTHR176
BGLY183

Functional Information from PROSITE/UniProt
site_idPS00743
Number of Residues20
DetailsBETA_LACTAMASE_B_1 Beta-lactamases class B signature 1. IiTHaHADciGGiktlker.G
ChainResidueDetails
AILE113-GLY133

site_idPS00744
Number of Residues13
DetailsBETA_LACTAMASE_B_2 Beta-lactamases class B signature 2. PqynILvGgCLVK
ChainResidueDetails
APRO209-LYS224

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:20677753, ECO:0000269|PubMed:24059435, ECO:0000269|PubMed:26482303, ECO:0000269|PubMed:7588620, ECO:0000269|PubMed:9761898
ChainResidueDetails
AHIS116
AHIS118
AHIS196
BHIS116
BHIS118
BHIS196

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:20677753, ECO:0000269|PubMed:24059435, ECO:0000269|PubMed:26482303
ChainResidueDetails
AASP120
ACYS221
AHIS263
BASP120
BCYS221
BHIS263

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:26482303
ChainResidueDetails
ALYS224
BLYS224

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:26482303, ECO:0000269|PubMed:9761898
ChainResidueDetails
AASN233
BASN233

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 2bmi
ChainResidueDetails
AASP120
AASN233

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 2bmi
ChainResidueDetails
BASP120
BASN233

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 2bmi
ChainResidueDetails
AASP120

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 2bmi
ChainResidueDetails
BASP120

site_idMCSA1
Number of Residues5
DetailsM-CSA 16
ChainResidueDetails
AHIS116metal ligand
AHIS118metal ligand
AASP120hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS196metal ligand
AASN233electrostatic stabiliser, hydrogen bond donor

site_idMCSA2
Number of Residues5
DetailsM-CSA 16
ChainResidueDetails
BHIS116metal ligand
BHIS118metal ligand
BASP120hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS196metal ligand
BASN233electrostatic stabiliser, hydrogen bond donor

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PDB entries from 2024-11-06

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