2B24
Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp. bound to indole
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005506 | molecular_function | iron ion binding |
A | 0019439 | biological_process | obsolete aromatic compound catabolic process |
A | 0044237 | biological_process | cellular metabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051213 | molecular_function | dioxygenase activity |
A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
B | 0006725 | biological_process | obsolete cellular aromatic compound metabolic process |
B | 0019380 | biological_process | 3-phenylpropionate catabolic process |
B | 0051213 | molecular_function | dioxygenase activity |
C | 0005506 | molecular_function | iron ion binding |
C | 0019439 | biological_process | obsolete aromatic compound catabolic process |
C | 0044237 | biological_process | cellular metabolic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0051213 | molecular_function | dioxygenase activity |
C | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
D | 0006725 | biological_process | obsolete cellular aromatic compound metabolic process |
D | 0019380 | biological_process | 3-phenylpropionate catabolic process |
D | 0051213 | molecular_function | dioxygenase activity |
E | 0005506 | molecular_function | iron ion binding |
E | 0019439 | biological_process | obsolete aromatic compound catabolic process |
E | 0044237 | biological_process | cellular metabolic process |
E | 0046872 | molecular_function | metal ion binding |
E | 0051213 | molecular_function | dioxygenase activity |
E | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
F | 0006725 | biological_process | obsolete cellular aromatic compound metabolic process |
F | 0019380 | biological_process | 3-phenylpropionate catabolic process |
F | 0051213 | molecular_function | dioxygenase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FE A 502 |
Chain | Residue |
A | HIS216 |
A | HIS221 |
A | ASP372 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FE C 502 |
Chain | Residue |
C | HIS216 |
C | HIS221 |
C | ASP372 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE FE E 502 |
Chain | Residue |
E | HIS216 |
E | HIS221 |
E | ASP372 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FES A 501 |
Chain | Residue |
A | CYS88 |
A | HIS90 |
A | ARG91 |
A | CYS108 |
A | HIS111 |
A | GLY112 |
A | TRP113 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE IND A 503 |
Chain | Residue |
A | ASP213 |
A | HIS295 |
A | PHE307 |
site_id | AC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE FES C 501 |
Chain | Residue |
C | CYS88 |
C | HIS90 |
C | ARG91 |
C | CYS108 |
C | TYR110 |
C | HIS111 |
C | GLY112 |
C | TRP113 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE IND C 503 |
Chain | Residue |
C | ASP213 |
C | HIS295 |
C | PHE307 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE FES E 501 |
Chain | Residue |
E | CYS88 |
E | HIS90 |
E | ARG91 |
E | CYS108 |
E | TYR110 |
E | HIS111 |
E | GLY112 |
E | TRP113 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE IND E 503 |
Chain | Residue |
E | ASP213 |
E | HIS295 |
E | PHE307 |
Functional Information from PROSITE/UniProt
site_id | PS00570 |
Number of Residues | 24 |
Details | RING_HYDROXYL_ALPHA Bacterial ring hydroxylating dioxygenases alpha-subunit signature. CrHRGmqvcraemGNtshfrCpYH |
Chain | Residue | Details |
A | CYS88-HIS111 |