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2AOI

Crystal structure analysis of HIV-1 protease with a substrate analog P1-P6

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 801
ChainResidue
ALYS7
AARG8
AHOH1190
BARG187
CARG309

site_idAC2
Number of Residues48
DetailsBINDING SITE FOR CHAIN C OF PEPTIDE INHIBITOR
ChainResidue
AASP29
AASP30
AVAL32
ALYS45
AMET46
AILE47
AGLY48
AGLY49
AILE50
APRO81
AVAL82
AILE84
ASO4801
AHOH1012
BARG108
BLEU123
BASP125
BGLY127
BALA128
BASP129
BASP130
BVAL132
BLYS145
BMET146
BILE147
BGLY148
BGLY149
BILE150
BGLN161
BILE172
BVAL182
BILE184
BARG187
BHOH1008
BHOH1015
BHOH1094
BHOH1200
CHOH1023
CHOH1026
CHOH1125
CHOH1166
CHOH1176
CHOH1183
CHOH1205
ALEU23
AASP25
AGLY27
AALA28

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26
BTHR126
BASP125

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
BASP125

246704

PDB entries from 2025-12-24

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