Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2AGO

Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AASP105
AGLU106
APOP401
AHOH416
BDG1814

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 403
ChainResidue
AASP7
APHE8
AASP105
APOP401

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 404
ChainResidue
AALA181
AILE186
AHOH431
AHOH446
AHOH475

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B 405
ChainResidue
CHOH70
CHOH93

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE MG A 406
ChainResidue
AASP294

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE POP A 401
ChainResidue
AASP7
APHE8
ATYR10
APHE11
ATHR45
AARG51
AASP105
ALYS159
AMG402
ACA403
AHOH409
AHOH416
BDG1814

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE:
ChainResidueDetails
AGLU106

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AASP7
AASP105

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Substrate discrimination
ChainResidueDetails
ATYR12

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon