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1Z9N

X-Ray structure of a Cu-Zn superoxide dismutase from Haemophilus ducreyi with haem bound at the dimer interface

Functional Information from GO Data
ChainGOidnamespacecontents
A0004784molecular_functionsuperoxide dismutase activity
A0005507molecular_functioncopper ion binding
A0006801biological_processsuperoxide metabolic process
A0016209molecular_functionantioxidant activity
A0016491molecular_functionoxidoreductase activity
A0019430biological_processremoval of superoxide radicals
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004784molecular_functionsuperoxide dismutase activity
B0005507molecular_functioncopper ion binding
B0006801biological_processsuperoxide metabolic process
B0016209molecular_functionantioxidant activity
B0016491molecular_functionoxidoreductase activity
B0019430biological_processremoval of superoxide radicals
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
C0004784molecular_functionsuperoxide dismutase activity
C0005507molecular_functioncopper ion binding
C0006801biological_processsuperoxide metabolic process
C0016209molecular_functionantioxidant activity
C0016491molecular_functionoxidoreductase activity
C0019430biological_processremoval of superoxide radicals
C0042597cellular_componentperiplasmic space
C0046872molecular_functionmetal ion binding
C0098869biological_processcellular oxidant detoxification
D0004784molecular_functionsuperoxide dismutase activity
D0005507molecular_functioncopper ion binding
D0006801biological_processsuperoxide metabolic process
D0016209molecular_functionantioxidant activity
D0016491molecular_functionoxidoreductase activity
D0019430biological_processremoval of superoxide radicals
D0042597cellular_componentperiplasmic space
D0046872molecular_functionmetal ion binding
D0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU A 200
ChainResidue
AHIS70
AHIS72
AHIS95
AHIS151

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 201
ChainResidue
AHIS95
AHIS104
AHIS113
AASP116

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU B 200
ChainResidue
BHIS72
BHIS95
BHIS151
BHIS70

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 201
ChainResidue
BHIS95
BHIS104
BHIS113
BASP116

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU C 200
ChainResidue
CHIS70
CHIS72
CHIS95
CHIS151

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN C 201
ChainResidue
CHIS95
CHIS104
CHIS113
CASP116

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU D 200
ChainResidue
DHIS70
DHIS72
DHIS95
DHIS151
DHOH319

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN D 201
ChainResidue
DHIS95
DHIS104
DHIS113
DASP116

site_idAC9
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM A 1001
ChainResidue
AHIS64
APHE121
AHIS124
AHOH1055
AHOH1086
AHOH1165
AHOH1182
AHOH1206
BHIS64
BGLY65
BVAL122
BMET123
BHIS124
CGLU23
DGLU48
DSER49
DALA50

site_idBC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM C 2001
ChainResidue
AGLU48
ASER49
AALA50
BGLU23
CHIS64
CGLY65
CVAL122
CMET123
CHIS124
CHOH2052
CHOH2143
CHOH2152
CHOH2165
CHOH2221
CHOH2235
CHOH2265
CHOH2279
DHIS64
DPHE121
DHIS124

Functional Information from PROSITE/UniProt
site_idPS00087
Number of Residues11
DetailsSOD_CU_ZN_1 Copper/Zinc superoxide dismutase signature 1. GFHIHEkPScE
ChainResidueDetails
AGLY68-GLU78

site_idPS00332
Number of Residues12
DetailsSOD_CU_ZN_2 Copper/Zinc superoxide dismutase signature 2. GGGGpRmACgvI
ChainResidueDetails
AGLY165-ILE176

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
AARG170
AHIS95

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
BARG170
BHIS95

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
CARG170
CHIS95

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
DARG170
DHIS95

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
AHIS95

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
BHIS95

site_idCSA7
Number of Residues1
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
CHIS95

site_idCSA8
Number of Residues1
DetailsAnnotated By Reference To The Literature 2jcw
ChainResidueDetails
DHIS95

247536

PDB entries from 2026-01-14

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