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1Z0D

GDP-Bound Rab5c GTPase

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
C0003924molecular_functionGTPase activity
C0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE PO4 A 600
ChainResidue
ASER30
AHOH706
AHOH760
CASN172
ALYS34
AALA78
AGLY79
ALEU80
AGLU81
AHOH702
AHOH703
AHOH704

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 601
ChainResidue
ASER35
AGDP700
AHOH706
AHOH709
AHOH718
AHOH724

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 800
ChainResidue
CSER35
CGDP900
CHOH907
CHOH913
CHOH916
CHOH923

site_idAC4
Number of Residues25
DetailsBINDING SITE FOR RESIDUE GDP A 700
ChainResidue
AALA31
AVAL32
AGLY33
ALYS34
ASER35
ASER36
APHE46
AHIS47
AGLU48
AGLN50
AASN134
ALYS135
AASP137
ALEU138
ASER164
AALA165
ALYS166
AMG601
AHOH706
AHOH708
AHOH716
AHOH718
AHOH736
AHOH752
CTHR167

site_idAC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE GDP C 900
ChainResidue
CALA31
CVAL32
CGLY33
CLYS34
CSER35
CSER36
CPHE46
CGLU48
CASN134
CLYS135
CASP137
CLEU138
CSER164
CALA165
CLYS166
CMG800
CHOH907
CHOH916
CHOH923
CHOH933
CHOH945
CHOH984

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsMotif: {"description":"Switch 1","evidences":[{"source":"UniProtKB","id":"P20339","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues32
DetailsMotif: {"description":"Switch 2","evidences":[{"source":"UniProtKB","id":"P20339","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues30
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P20339","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P51148","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ALEU80

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CLEU80

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AALA31

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CALA31

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PDB entries from 2025-10-08

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