1YZN
GppNHp-Bound Ypt1p GTPase
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 301 |
| Chain | Residue |
| A | SER22 |
| A | THR40 |
| A | GNP300 |
| A | HOH306 |
| A | HOH307 |
| site_id | AC2 |
| Number of Residues | 30 |
| Details | BINDING SITE FOR RESIDUE GNP A 300 |
| Chain | Residue |
| A | GLY20 |
| A | LYS21 |
| A | SER22 |
| A | CYS23 |
| A | TYR33 |
| A | THR34 |
| A | ASN35 |
| A | ASP36 |
| A | TYR37 |
| A | SER39 |
| A | THR40 |
| A | GLY66 |
| A | ASN121 |
| A | LYS122 |
| A | ASP124 |
| A | LEU125 |
| A | SER151 |
| A | ALA152 |
| A | LEU153 |
| A | MG301 |
| A | HOH303 |
| A | HOH304 |
| A | HOH306 |
| A | HOH307 |
| A | HOH309 |
| A | HOH314 |
| A | ARG1 |
| A | SER17 |
| A | GLY18 |
| A | VAL19 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 17 |
| Details | Region: {"description":"Interaction with GDI1","evidences":[{"source":"PubMed","id":"14576435","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Motif: {"description":"Effector region","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 17 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"14576435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16034420","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16395334","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1UKV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YZN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BCG","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"16034420","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YZN","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLN67 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLY18 |
