1YR6

PAB0955 crystal structure : a GTPase in Apo form from Pyrococcus abyssi

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0003924	molecular_function	GTPase activity
A	0005525	molecular_function	GTP binding
A	0005737	cellular_component	cytoplasm
A	0016787	molecular_function	hydrolase activity
A	0046872	molecular_function	metal ion binding

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	7
Details	Motif: {"description":"G1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	3
Details	Motif: {"description":"G2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Motif: {"description":"Gly-Pro-Asn (GPN)-loop; involved in dimer interface","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Motif: {"description":"G3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	3
Details	Motif: {"description":"G4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	2
Details	Motif: {"description":"G5","evidences":[{"source":"PROSITE-ProRule","id":"PRU01416","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YR7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	5
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YR7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1YR8","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YRB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OXR","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P47122","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YR9","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"1YR7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	1
Details	Site: {"description":"Stabilizes the phosphate intermediate; shared with dimeric partner","evidences":[{"source":"PubMed","id":"17468740","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---