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1YM1

X-ray crystallographic structure of CTX-M-9 beta-lactamase complexed with a boronic acid inhibitor (SM2)

Functional Information from GO Data
ChainGOidnamespacecontents
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0030655biological_processbeta-lactam antibiotic catabolic process
A0046677biological_processresponse to antibiotic
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0030655biological_processbeta-lactam antibiotic catabolic process
B0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 2011
ChainResidue
ASER70
ASER130
ATHR235
AGLY236
ASER237
AHOH3087
AHOH3323
AHOH3745
AHOH3746

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 2012
ChainResidue
BSER70
BSER130
BTHR235
BGLY236
BSER237
BHOH3064
BHOH3508
BHOH3747
BHOH3749

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 A 2013
ChainResidue
AARG153
AGLU158
AHOH3301
AHOH3346
AHOH3688
AHOH3827
BHIS197
BARG204
BHOH3335
BHOH3612

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 B 2014
ChainResidue
APRO177
AHOH3159
AHOH3752
BLYS88
BTHR202
BGLN203
BHOH3051
BHOH3368
BHOH3553
BHOH3666
BHOH3774

site_idAC5
Number of Residues21
DetailsBINDING SITE FOR RESIDUE SM2 A 2001
ChainResidue
ACYS69
ASER70
ALYS73
AASN104
ATYR105
ASER130
AASN132
AGLU166
AASN170
ALYS234
ATHR235
AGLY236
ASER237
AASP240
AHOH3332
AHOH3380
AHOH3462
AHOH3744
AHOH3745
AHOH3746
AHOH3837

site_idAC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE SM2 B 2002
ChainResidue
BCYS69
BSER70
BLYS73
BASN104
BTYR105
BSER130
BASN132
BGLU166
BASN170
BLYS234
BTHR235
BGLY236
BSER237
BASP240
BARG276
BHOH3456
BHOH3747
BHOH3748
BHOH3749
BHOH3838

Functional Information from PROSITE/UniProt
site_idPS00146
Number of Residues16
DetailsBETA_LACTAMASE_A Beta-lactamase class-A active site. FpMCSTsKvmaAAAVL
ChainResidueDetails
APHE66-LEU81

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1btl
ChainResidueDetails
AGLU166
ALYS73
ASER130
ASER70

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1btl
ChainResidueDetails
BGLU166
BLYS73
BSER130
BSER70

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PDB entries from 2024-09-04

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