Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YKZ

Effect of alcohols on protein hydration

Functional Information from GO Data
ChainGOidnamespacecontents
X0003796molecular_functionlysozyme activity
X0005515molecular_functionprotein binding
X0005576cellular_componentextracellular region
X0005615cellular_componentextracellular space
X0005737cellular_componentcytoplasm
X0005783cellular_componentendoplasmic reticulum
X0016231molecular_functionbeta-N-acetylglucosaminidase activity
X0016798molecular_functionhydrolase activity, acting on glycosyl bonds
X0016998biological_processcell wall macromolecule catabolic process
X0031640biological_processkilling of cells of another organism
X0042742biological_processdefense response to bacterium
X0042802molecular_functionidentical protein binding
X0050829biological_processdefense response to Gram-negative bacterium
X0050830biological_processdefense response to Gram-positive bacterium
X0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA X 1076
ChainResidue
XSER60
XCYS64
XSER72
XARG73
XHOH3795

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL X 1037
ChainResidue
XTYR23
XASN113

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PTL X 3784
ChainResidue
XCYS6
XGLU7
XGLY4
XARG5

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PTL X 3785
ChainResidue
XGLN57
XILE58
XASN59
XTRP63
XALA107
XTRP108
XVAL109

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
XCYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
XGLU35
XASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
XASP101

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 132l
ChainResidueDetails
XGLU35
XASP52

site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
XGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
XASN46
XASP48
XSER50
XASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
XASN59

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon