Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YEY

Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0016052biological_processcarbohydrate catabolic process
A0016829molecular_functionlyase activity
A0016836molecular_functionhydro-lyase activity
A0046872molecular_functionmetal ion binding
A0050023molecular_functionL-fuconate dehydratase activity
B0000287molecular_functionmagnesium ion binding
B0016052biological_processcarbohydrate catabolic process
B0016829molecular_functionlyase activity
B0016836molecular_functionhydro-lyase activity
B0046872molecular_functionmetal ion binding
B0050023molecular_functionL-fuconate dehydratase activity
C0000287molecular_functionmagnesium ion binding
C0016052biological_processcarbohydrate catabolic process
C0016829molecular_functionlyase activity
C0016836molecular_functionhydro-lyase activity
C0046872molecular_functionmetal ion binding
C0050023molecular_functionL-fuconate dehydratase activity
D0000287molecular_functionmagnesium ion binding
D0016052biological_processcarbohydrate catabolic process
D0016829molecular_functionlyase activity
D0016836molecular_functionhydro-lyase activity
D0046872molecular_functionmetal ion binding
D0050023molecular_functionL-fuconate dehydratase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 6001
ChainResidue
AASP248
AASN250
AGLU274
AGLU301
AHOH5231
AHOH5232

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 6002
ChainResidue
BGLU301
BHOH5233
BHOH5234
BLYS220
BASP248
BGLU274

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 6003
ChainResidue
CLYS220
CASP248
CGLU274
CGLU301
CHOH5235
CHOH5236

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG D 6004
ChainResidue
DLYS220
DASP248
DASN250
DGLU274
DGLU301
DHOH5237
DHOH5238

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:17144652
ChainResidueDetails
ALYS220
BLYS220
CLYS220
DLYS220

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000255
ChainResidueDetails
AHIS351
BHIS351
CHIS351
DHIS351

site_idSWS_FT_FI3
Number of Residues32
DetailsBINDING: BINDING => ECO:0000269|PubMed:17144652
ChainResidueDetails
BGLU274
BGLU301
BHIS351
BGLU382
CGLY22
CTYR32
CLYS218
CASN250
CGLU274
CGLU301
CHIS351
CGLU382
DGLY22
DTYR32
DLYS218
DASN250
DGLU274
DGLU301
DHIS351
DGLU382
AGLY22
ATYR32
ALYS218
AASN250
AGLU274
AGLU301
AHIS351
AGLU382
BGLY22
BTYR32
BLYS218
BASN250

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:17144652, ECO:0000269|Ref.2
ChainResidueDetails
AASP248
BASP248
CASP248
DASP248

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 961
ChainResidueDetails
ALYS220proton acceptor, proton donor
AASP248modifies pKa
AGLU274metal ligand
AGLU301metal ligand
AASP324metal ligand
AHIS351proton acceptor, proton donor

site_idMCSA2
Number of Residues6
DetailsM-CSA 961
ChainResidueDetails
BLYS220proton acceptor, proton donor
BASP248modifies pKa
BGLU274metal ligand
BGLU301metal ligand
BASP324metal ligand
BHIS351proton acceptor, proton donor

site_idMCSA3
Number of Residues6
DetailsM-CSA 961
ChainResidueDetails
CLYS220proton acceptor, proton donor
CASP248modifies pKa
CGLU274metal ligand
CGLU301metal ligand
CASP324metal ligand
CHIS351proton acceptor, proton donor

site_idMCSA4
Number of Residues6
DetailsM-CSA 961
ChainResidueDetails
DLYS220proton acceptor, proton donor
DASP248modifies pKa
DGLU274metal ligand
DGLU301metal ligand
DASP324metal ligand
DHIS351proton acceptor, proton donor

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon