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1Y6H

Crystal structure of LIPDF

Replaces:  1RN5
Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0043686biological_processco-translational protein modification
A0046872molecular_functionmetal ion binding
B0006412biological_processtranslation
B0016787molecular_functionhydrolase activity
B0042586molecular_functionpeptide deformylase activity
B0043686biological_processco-translational protein modification
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 513
ChainResidue
AGLN53
ACYS101
AHIS143
AHIS147
AFMT723

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 513
ChainResidue
BFMT716
BGLN53
BCYS101
BHIS143
BHIS147

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GLY B 1001
ChainResidue
BVAL47
BTYR71
BPHE97
BGLU99
BGLY100
BTYR136
BHIS143
BGLU144
BFMT717

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE FMT B 716
ChainResidue
BGLY48
BGLN53
BCYS101
BLEU102
BHIS143
BGLU144
BHIS147
BZN513
BFMT717

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE FMT B 717
ChainResidue
BGLY46
BVAL47
BARG70
BTYR71
BGLY100
BCYS101
BLEU102
BFMT716
BGLY1001
BHOH1012

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 718
ChainResidue
AARG80
ALYS137
ATYR141

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT A 719
ChainResidue
AGLY106
APHE165
AASN166
AGLU167
AHOH781
BARG7

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT B 720
ChainResidue
BASN84
BVAL86
BTRP121
BGLN128

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE FMT B 721
ChainResidue
BGLU79
BARG80
BHIS173
BHOH1027
BHOH1077
BHOH1078
BHOH1090
BHOH1152

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FMT B 722
ChainResidue
APRO11
ALYS15
BARG42
BHIS173
BASN174
BVAL175
BHOH1122

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT A 723
ChainResidue
AGLY48
AGLN53
ACYS101
ALEU102
AGLU144
AZN513

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AGLU144
BGLU144

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ACYS101
AHIS143
AHIS147
BCYS101
BHIS143
BHIS147

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1bs4
ChainResidueDetails
ALEU102
AGLY48
AGLN53
AGLU144

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1bs4
ChainResidueDetails
BLEU102
BGLY48
BGLN53
BGLU144

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PDB entries from 2024-07-31

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