1Y2M
Crystal structure of phenylalanine ammonia-lyase from yeast Rhododporidium toruloides
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006559 | biological_process | L-phenylalanine catabolic process |
| A | 0009800 | biological_process | cinnamic acid biosynthetic process |
| A | 0016841 | molecular_function | ammonia-lyase activity |
| A | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| A | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006559 | biological_process | L-phenylalanine catabolic process |
| B | 0009800 | biological_process | cinnamic acid biosynthetic process |
| B | 0016841 | molecular_function | ammonia-lyase activity |
| B | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| B | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006559 | biological_process | L-phenylalanine catabolic process |
| C | 0009800 | biological_process | cinnamic acid biosynthetic process |
| C | 0016841 | molecular_function | ammonia-lyase activity |
| C | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| C | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006559 | biological_process | L-phenylalanine catabolic process |
| D | 0009800 | biological_process | cinnamic acid biosynthetic process |
| D | 0016841 | molecular_function | ammonia-lyase activity |
| D | 0045548 | molecular_function | phenylalanine ammonia-lyase activity |
| D | 0052883 | molecular_function | tyrosine ammonia-lyase activity |
Functional Information from PROSITE/UniProt
| site_id | PS00488 |
| Number of Residues | 17 |
| Details | PAL_HISTIDASE Phenylalanine and histidine ammonia-lyases signature. GTISASGDLsPLSyiaA |
| Chain | Residue | Details |
| A | GLY207-ALA223 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q68G84","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15350127","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1T6J","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"2,3-didehydroalanine (Ser)","evidences":[{"source":"PubMed","id":"15350127","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Cross-link: {"description":"5-imidazolinone (Ala-Gly)","evidences":[{"source":"PubMed","id":"15350127","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 5 |
| Details | Annotated By Reference To The Literature 1b8f |
| Chain | Residue | Details |
| A | SER212 | |
| A | GLN500 | |
| A | ALA211 | |
| A | GLY213 | |
| A | TYR363 |
| site_id | CSA2 |
| Number of Residues | 5 |
| Details | Annotated By Reference To The Literature 1b8f |
| Chain | Residue | Details |
| B | SER212 | |
| B | GLN500 | |
| B | ALA211 | |
| B | GLY213 | |
| B | TYR363 |
| site_id | CSA3 |
| Number of Residues | 5 |
| Details | Annotated By Reference To The Literature 1b8f |
| Chain | Residue | Details |
| C | SER212 | |
| C | GLN500 | |
| C | ALA211 | |
| C | GLY213 | |
| C | TYR363 |
| site_id | CSA4 |
| Number of Residues | 5 |
| Details | Annotated By Reference To The Literature 1b8f |
| Chain | Residue | Details |
| D | SER212 | |
| D | GLN500 | |
| D | ALA211 | |
| D | GLY213 | |
| D | TYR363 |
