1WR6
Crystal structure of GGA3 GAT domain in complex with ubiquitin
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005802 | cellular_component | trans-Golgi network |
| A | 0006886 | biological_process | intracellular protein transport |
| A | 0031267 | molecular_function | small GTPase binding |
| A | 0035091 | molecular_function | phosphatidylinositol binding |
| A | 0043130 | molecular_function | ubiquitin binding |
| B | 0005802 | cellular_component | trans-Golgi network |
| B | 0006886 | biological_process | intracellular protein transport |
| B | 0031267 | molecular_function | small GTPase binding |
| B | 0035091 | molecular_function | phosphatidylinositol binding |
| B | 0043130 | molecular_function | ubiquitin binding |
| C | 0005802 | cellular_component | trans-Golgi network |
| C | 0006886 | biological_process | intracellular protein transport |
| C | 0031267 | molecular_function | small GTPase binding |
| C | 0035091 | molecular_function | phosphatidylinositol binding |
| C | 0043130 | molecular_function | ubiquitin binding |
| D | 0005802 | cellular_component | trans-Golgi network |
| D | 0006886 | biological_process | intracellular protein transport |
| D | 0031267 | molecular_function | small GTPase binding |
| D | 0035091 | molecular_function | phosphatidylinositol binding |
| D | 0043130 | molecular_function | ubiquitin binding |
Functional Information from PROSITE/UniProt
| site_id | PS00299 |
| Number of Residues | 26 |
| Details | UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD |
| Chain | Residue | Details |
| E | LYS27-ASP52 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | SITE: Interacts with activating enzyme |
| Chain | Residue | Details |
| G | ARG54 | |
| G | ARG72 | |
| H | ARG54 | |
| H | ARG72 | |
| E | ARG54 | |
| E | ARG72 | |
| F | ARG54 | |
| F | ARG72 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | SITE: Essential for function |
| Chain | Residue | Details |
| E | HIS68 | |
| F | HIS68 | |
| G | HIS68 | |
| H | HIS68 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | MOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48 |
| Chain | Residue | Details |
| E | SER65 | |
| F | SER65 | |
| G | SER65 | |
| H | SER65 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | MOD_RES: ADP-ribosylglycine => ECO:0000250|UniProtKB:P0CG48 |
| Chain | Residue | Details |
| E | GLY76 | |
| F | GLY76 | |
| G | GLY76 | |
| H | GLY76 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 28 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48 |
| Chain | Residue | Details |
| E | LYS33 | |
| E | LYS48 | |
| E | LYS63 | |
| F | LYS6 | |
| F | LYS11 | |
| F | LYS27 | |
| F | LYS29 | |
| F | LYS33 | |
| F | LYS48 | |
| F | LYS63 | |
| G | LYS6 | |
| G | LYS11 | |
| G | LYS27 | |
| G | LYS29 | |
| G | LYS33 | |
| G | LYS48 | |
| G | LYS63 | |
| H | LYS6 | |
| H | LYS11 | |
| H | LYS27 | |
| H | LYS29 | |
| H | LYS33 | |
| H | LYS48 | |
| H | LYS63 | |
| E | LYS6 | |
| E | LYS11 | |
| E | LYS27 | |
| E | LYS29 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 8 |
| Details | CROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214 |
| Chain | Residue | Details |
| E | GLY76 | |
| F | GLY76 | |
| G | GLY76 | |
| H | GLY76 |
