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1WL9

Structure of aminopeptidase P from E. coli

Replaces:  1AZ9
Functional Information from GO Data
ChainGOidnamespacecontents
A0004177molecular_functionaminopeptidase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008235molecular_functionmetalloexopeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0030145molecular_functionmanganese ion binding
A0032991cellular_componentprotein-containing complex
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0046914molecular_functiontransition metal ion binding
A0051289biological_processprotein homotetramerization
A0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 1001
ChainResidue
AASP271
AHIS354
AGLU383
AGLU406
AMN1002
AHOH1004
AHOH1070

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MN A 1002
ChainResidue
AASP271
ATHR273
AGLU406
AMN1001
AHOH1004
AHOH1559
ATYR229
AASP260

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1003
ChainResidue
AVAL80
APHE110
ASER111

Functional Information from PROSITE/UniProt
site_idPS00491
Number of Residues13
DetailsPROLINE_PEPTIDASE Aminopeptidase P and proline dipeptidase signature. HGLSHwLGLdVHD
ChainResidueDetails
AHIS350-ASP362

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING:
ChainResidueDetails
AALA261
AILE272
APRO384
AASP407
ATRP355

Catalytic Information from CSA
site_idMCSA1
Number of Residues11
DetailsM-CSA 379
ChainResidueDetails
AILE272metal ligand
AGLY351electrostatic stabiliser
ATRP355metal ligand
AASP362electrostatic stabiliser
APRO384activator, metal ligand, proton shuttle (general acid/base)
AILE388proton shuttle (general acid/base)
AILE405proton shuttle (general acid/base)
AASP407metal ligand
ASER39activator, electrostatic stabiliser
ATYR244electrostatic stabiliser
AALA261metal ligand, proton shuttle (general acid/base)

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PDB entries from 2024-05-01

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