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1W1B

Structure of Bacillus subtilis PdaA with Cadmium, a family 4 Carbohydrate esterase.

Functional Information from GO Data
ChainGOidnamespacecontents
10005975biological_processcarbohydrate metabolic process
10016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
20005975biological_processcarbohydrate metabolic process
20016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD 11259
ChainResidue
1HIS124
1HIS128
1HOH2041
1HOH2083
1HOH2116

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD 11260
ChainResidue
1HIS127
1HOH2030
1HOH2065

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD 21259
ChainResidue
2HIS128
2HOH2033
2HOH2036
2HOH2109
2HIS124

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CD 21260
ChainResidue
2HIS127

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues362
DetailsDomain: {"description":"NodB homology","evidences":[{"source":"PROSITE-ProRule","id":"PRU01014","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsSite: {"description":"Raises pKa of active site His","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

245011

PDB entries from 2025-11-19

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