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1VQT

Crystal structure of Orotidine 5'-phosphate decarboxylase (TM0332) from Thermotoga maritima at 2.00 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 202
ChainResidue
ALYS36
ALYS37
AASP40

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 203
ChainResidue
AVAL164
AHOH248

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 204
ChainResidue
AEDO209
AASP52
ALYS54
ALEU148
APRO150

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 205
ChainResidue
ALEU47
AALA73
AHOH269

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 206
ChainResidue
AHIS-1
AHIS0

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 207
ChainResidue
ATHR166
AGLU168

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 208
ChainResidue
ASER60
ATHR61
AARG64
AARG181
AEDO210

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 209
ChainResidue
ASER6
AASP8
ALYS26
AEDO204
AHOH246

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 210
ChainResidue
AASP8
AARG64
AEDO208

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIlDlKfcDIPsTV
ChainResidueDetails
AILE49-VAL62

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU10110
ChainResidueDetails
ALYS54

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP8
ALYS26
AGLY180
AARG181
AASP52
ATHR106
AARG153
AGLN161

221051

PDB entries from 2024-06-12

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