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1VP4

Crystal structure of a putative aminotransferase (tm1131) from thermotoga maritima msb8 at 1.82 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0008483molecular_functiontransaminase activity
A0009058biological_processbiosynthetic process
A0030170molecular_functionpyridoxal phosphate binding
A1901605biological_processalpha-amino acid metabolic process
B0008483molecular_functiontransaminase activity
B0009058biological_processbiosynthetic process
B0030170molecular_functionpyridoxal phosphate binding
B1901605biological_processalpha-amino acid metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PLP A 501
ChainResidue
AGLY105
ATHR245
ASER247
ALYS248
AARG255
AHOH641
BTYR69
ASER106
AGLN107
ATYR131
AVAL182
AASN187
AASP215
APRO217
ATYR218

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE UNL A 601
ChainResidue
AGLY39
AASN187
AARG381
AEDO604
AHOH667
BTYR69

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PLP B 501
ChainResidue
ATYR69
BGLY105
BSER106
BGLN107
BTYR131
BVAL182
BASN187
BASP215
BPRO217
BTYR218
BTHR245
BSER247
BLYS248
BARG255
BHOH673

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE UNL B 601
ChainResidue
BGLY38
BGLY39
BTYR131
BASN187
BARG381
BHOH743

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 602
ChainResidue
BASP216
BPRO217
BGLY219
BALA220
BASN244
BTHR245

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 602
ChainResidue
AARG290
AGLU293
AARG294
AHOH699

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 603
ChainResidue
ATHR93
AGLY94
ALEU95
AHOH646

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 603
ChainResidue
AFMT617
BASP119
BASP120
BTYR141
BLEU142
BHOH672

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 604
ChainResidue
AILE21
ALEU25
AGLY37
AGLY38
AGLY39
AUNL601
AHOH667

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 604
ChainResidue
BTHR93
BGLY94
BLEU95
BHOH651

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 605
ChainResidue
ALYS330
ATRP331

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT A 606
ChainResidue
AASP216
APRO217
AGLY219
AALA220
AASN244
ATHR245

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 607
ChainResidue
AALA28
ASER35
AGLY38
ALEU386
AHOH685

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT B 605
ChainResidue
BTHR45
BVAL249
BTHR304
BFMT608

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 608
ChainResidue
AASP152
AVAL191
ATHR192
AHOH640

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 609
ChainResidue
AILE92
ATHR93
AHOH719

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 610
ChainResidue
ATHR304
AHOH665
AHOH677
ATHR45
AVAL249

site_idBC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FMT B 606
ChainResidue
BPRO237
BGLU238
BVAL240
BVAL241
BGLY261
BSER262
BPHE265

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 611
ChainResidue
AARG400
AFMT618
BLYS49
BGLU53
BTYR295

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT B 607
ChainResidue
BASP152
BVAL191
BTHR192

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FMT B 608
ChainResidue
BTHR45
BPHE46
BLYS248
BLEU250
BTYR308
BFMT605

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT B 609
ChainResidue
BASP127
BMSE155
BVAL181
BVAL182
BTHR193

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 612
ChainResidue
AASP128
ALYS371
AVAL372
ATYR373
AGLU375

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 613
ChainResidue
AASP127
AVAL181
AVAL182
AHIS186
ATHR193

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 614
ChainResidue
AGLY94
AASP96
AHIS411

site_idCC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 615
ChainResidue
ALEU292
AGLU293
ATYR295

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 616
ChainResidue
ALEU150
AGLU151
AASP152
AHOH701

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 617
ChainResidue
AASP120
ATYR141
ALEU142
AHOH672
BEDO603

site_idDC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 618
ChainResidue
AGLU401
AFMT611
BGLU53

site_idDC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE FMT A 619
ChainResidue
APHE348

site_idDC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 620
ChainResidue
ALYS56
AASP325
AARG400
AHOH676
BGLU53

site_idDC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT B 610
ChainResidue
BTHR71
BGLU73
BGLY74
BLYS79

site_idDC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT B 611
ChainResidue
BGLN80
BASP96
BGLU97
BHIS411
BHOH677

site_idDC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT B 612
ChainResidue
BSER70
BTHR72

site_idDC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 621
ChainResidue
ASER18
AHOH809
BVAL270
BGLN274

site_idDC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 622
ChainResidue
APRO237
AVAL240
AVAL241
AGLY261
ASER262

site_idEC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT B 613
ChainResidue
BLEU25
BSER35
BLEU386

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP215
ALYS248
ATYR131

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BASP215
BLYS248
BTYR131

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP215
APHE138
ALYS248

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BASP215
BPHE138
BLYS248

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
AASP215
ATYR131
BTHR71

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
ATHR71
BASP215
BTYR131

site_idCSA7
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
ATYR69

site_idCSA8
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BTYR69

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PDB entries from 2024-07-31

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