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1VH3

Crystal structure of CMP-KDO synthetase

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008690molecular_function3-deoxy-manno-octulosonate cytidylyltransferase activity
A0009103biological_processlipopolysaccharide biosynthetic process
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0019294biological_processketo-3-deoxy-D-manno-octulosonic acid biosynthetic process
A0033468biological_processCMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
A0044281biological_processsmall molecule metabolic process
A1901137biological_processcarbohydrate derivative biosynthetic process
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008690molecular_function3-deoxy-manno-octulosonate cytidylyltransferase activity
B0009103biological_processlipopolysaccharide biosynthetic process
B0016740molecular_functiontransferase activity
B0016779molecular_functionnucleotidyltransferase activity
B0019294biological_processketo-3-deoxy-D-manno-octulosonic acid biosynthetic process
B0033468biological_processCMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
B0044281biological_processsmall molecule metabolic process
B1901137biological_processcarbohydrate derivative biosynthetic process
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0008690molecular_function3-deoxy-manno-octulosonate cytidylyltransferase activity
C0009103biological_processlipopolysaccharide biosynthetic process
C0016740molecular_functiontransferase activity
C0016779molecular_functionnucleotidyltransferase activity
C0019294biological_processketo-3-deoxy-D-manno-octulosonic acid biosynthetic process
C0033468biological_processCMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
C0044281biological_processsmall molecule metabolic process
C1901137biological_processcarbohydrate derivative biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE CMK A 263
ChainResidue
APRO8
AASP100
AVAL142
AARG157
ALYS175
AHIS185
ATYR189
AGLU214
AGLN215
AHOH287
AHOH294
AALA9
AHOH297
AHOH304
AARG10
AHIS72
AASN73
ASER74
AARG78
AGLN98
AGLY99

site_idAC2
Number of Residues24
DetailsBINDING SITE FOR RESIDUE CMK B 263
ChainResidue
AARG164
BPRO8
BALA9
BARG10
BLYS19
BHIS72
BASN73
BSER74
BGLY75
BARG78
BGLN98
BGLY99
BASP100
BASN140
BVAL142
BARG157
BHIS185
BTYR189
BLYS212
BLEU213
BGLU214
BGLN215
BVAL238
BHOH287

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1hv9
ChainResidueDetails
BARG15

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1hv9
ChainResidueDetails
CARG15

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PDB entries from 2025-06-18

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