1VGY
Crystal structure of succinyl diaminopimelate desuccinylase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006526 | biological_process | L-arginine biosynthetic process |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0008777 | molecular_function | acetylornithine deacetylase activity |
| A | 0009014 | molecular_function | succinyl-diaminopimelate desuccinylase activity |
| A | 0009085 | biological_process | lysine biosynthetic process |
| A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0019877 | biological_process | diaminopimelate biosynthetic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050897 | molecular_function | cobalt ion binding |
| B | 0006526 | biological_process | L-arginine biosynthetic process |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0008777 | molecular_function | acetylornithine deacetylase activity |
| B | 0009014 | molecular_function | succinyl-diaminopimelate desuccinylase activity |
| B | 0009085 | biological_process | lysine biosynthetic process |
| B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0019877 | biological_process | diaminopimelate biosynthetic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0050897 | molecular_function | cobalt ion binding |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | ACT_SITE: ACT_SITE => ECO:0000250 |
| Chain | Residue | Details |
| A | ASP70 | |
| B | ASP70 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | ACT_SITE: Proton acceptor => ECO:0000250 |
| Chain | Residue | Details |
| A | GLU135 | |
| B | GLU135 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| A | HIS68 | |
| B | HIS350 | |
| A | ASP101 | |
| A | GLU136 | |
| A | GLU164 | |
| A | HIS350 | |
| B | HIS68 | |
| B | ASP101 | |
| B | GLU136 | |
| B | GLU164 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1amp |
| Chain | Residue | Details |
| A | GLU135 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1amp |
| Chain | Residue | Details |
| B | GLU135 |
| site_id | CSA3 |
| Number of Residues | 6 |
| Details | Annotated By Reference To The Literature 1amp |
| Chain | Residue | Details |
| A | HIS350 | |
| A | GLU136 | |
| A | GLU135 | |
| A | HIS68 | |
| A | GLU164 | |
| A | ASP101 |
| site_id | CSA4 |
| Number of Residues | 6 |
| Details | Annotated By Reference To The Literature 1amp |
| Chain | Residue | Details |
| B | HIS350 | |
| B | GLU136 | |
| B | GLU135 | |
| B | HIS68 | |
| B | GLU164 | |
| B | ASP101 |
