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1VFT

Crystal structure of L-cycloserine-bound form of alanine racemase from D-cycloserine-producing Streptomyces lavendulae

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005829cellular_componentcytosol
A0006522biological_processalanine metabolic process
A0008784molecular_functionalanine racemase activity
A0009252biological_processpeptidoglycan biosynthetic process
A0016853molecular_functionisomerase activity
A0030170molecular_functionpyridoxal phosphate binding
A0030632biological_processD-alanine biosynthetic process
B0003824molecular_functioncatalytic activity
B0005829cellular_componentcytosol
B0006522biological_processalanine metabolic process
B0008784molecular_functionalanine racemase activity
B0009252biological_processpeptidoglycan biosynthetic process
B0016853molecular_functionisomerase activity
B0030170molecular_functionpyridoxal phosphate binding
B0030632biological_processD-alanine biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 617
ChainResidue
AMET107

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE DCS A 401
ChainResidue
ATHR225
AGLY226
ALEU227
ATYR361
AHOH517
AHOH520
AHOH537
BTYR1270
BALA1317
BMET1318
ALYS38
ATYR42
AARG136
AHIS168
AASN208
ASER209
APRO210
AARG224

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE DCS B 1401
ChainResidue
ATYR270
AALA317
AMET318
AASP319
BHOH550
BLYS1038
BTYR1042
BARG1136
BTRP1166
BHIS1168
BSER1209
BARG1224
BGLY1226
BLEU1227
BTYR1361

Functional Information from PROSITE/UniProt
site_idPS00395
Number of Residues11
DetailsALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKSNAYGHG
ChainResidueDetails
AALA35-GLY45

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RnaSGRgpvlv.AgKiRrAAG
ChainResidueDetails
AARG295-GLY314

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1bd0
ChainResidueDetails
ALYS38
AARG136

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1bd0
ChainResidueDetails
BLYS1038
BARG1136

226707

PDB entries from 2024-10-30

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