Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0009579 | cellular_component | thylakoid |
| A | 0015979 | biological_process | photosynthesis |
| A | 0016020 | cellular_component | membrane |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0022904 | biological_process | respiratory electron transport chain |
| A | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| A | 0042651 | cellular_component | thylakoid membrane |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
| B | 0009055 | molecular_function | electron transfer activity |
| B | 0009579 | cellular_component | thylakoid |
| B | 0009767 | biological_process | photosynthetic electron transport chain |
| B | 0015979 | biological_process | photosynthesis |
| B | 0016020 | cellular_component | membrane |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| B | 0042651 | cellular_component | thylakoid membrane |
| B | 1902600 | biological_process | proton transmembrane transport |
| C | 0005506 | molecular_function | iron ion binding |
| C | 0009055 | molecular_function | electron transfer activity |
| C | 0009579 | cellular_component | thylakoid |
| C | 0015979 | biological_process | photosynthesis |
| C | 0016020 | cellular_component | membrane |
| C | 0020037 | molecular_function | heme binding |
| C | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| C | 0042651 | cellular_component | thylakoid membrane |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004497 | molecular_function | monooxygenase activity |
| D | 0009496 | molecular_function | plastoquinol--plastocyanin reductase activity |
| D | 0009579 | cellular_component | thylakoid |
| D | 0015979 | biological_process | photosynthesis |
| D | 0016020 | cellular_component | membrane |
| D | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| D | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0051536 | molecular_function | iron-sulfur cluster binding |
| D | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| D | 0055085 | biological_process | transmembrane transport |
| E | 0009055 | molecular_function | electron transfer activity |
| E | 0009512 | cellular_component | cytochrome b6f complex |
| E | 0009579 | cellular_component | thylakoid |
| E | 0015979 | biological_process | photosynthesis |
| E | 0016020 | cellular_component | membrane |
| E | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| E | 0042651 | cellular_component | thylakoid membrane |
| F | 0009055 | molecular_function | electron transfer activity |
| F | 0009512 | cellular_component | cytochrome b6f complex |
| F | 0009579 | cellular_component | thylakoid |
| F | 0015979 | biological_process | photosynthesis |
| F | 0016020 | cellular_component | membrane |
| F | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| F | 0042651 | cellular_component | thylakoid membrane |
| G | 0009512 | cellular_component | cytochrome b6f complex |
| G | 0009579 | cellular_component | thylakoid |
| G | 0015979 | biological_process | photosynthesis |
| G | 0016020 | cellular_component | membrane |
| G | 0017004 | biological_process | cytochrome complex assembly |
| G | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| G | 0042651 | cellular_component | thylakoid membrane |
| H | 0009055 | molecular_function | electron transfer activity |
| H | 0009512 | cellular_component | cytochrome b6f complex |
| H | 0009579 | cellular_component | thylakoid |
| H | 0015979 | biological_process | photosynthesis |
| H | 0016020 | cellular_component | membrane |
| H | 0017004 | biological_process | cytochrome complex assembly |
| H | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| H | 0042651 | cellular_component | thylakoid membrane |
| N | 0009055 | molecular_function | electron transfer activity |
| N | 0009579 | cellular_component | thylakoid |
| N | 0015979 | biological_process | photosynthesis |
| N | 0016020 | cellular_component | membrane |
| N | 0016491 | molecular_function | oxidoreductase activity |
| N | 0022904 | biological_process | respiratory electron transport chain |
| N | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| N | 0042651 | cellular_component | thylakoid membrane |
| N | 0046872 | molecular_function | metal ion binding |
| O | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
| O | 0009055 | molecular_function | electron transfer activity |
| O | 0009579 | cellular_component | thylakoid |
| O | 0009767 | biological_process | photosynthetic electron transport chain |
| O | 0015979 | biological_process | photosynthesis |
| O | 0016020 | cellular_component | membrane |
| O | 0016491 | molecular_function | oxidoreductase activity |
| O | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| O | 0042651 | cellular_component | thylakoid membrane |
| O | 1902600 | biological_process | proton transmembrane transport |
| P | 0005506 | molecular_function | iron ion binding |
| P | 0009055 | molecular_function | electron transfer activity |
| P | 0009579 | cellular_component | thylakoid |
| P | 0015979 | biological_process | photosynthesis |
| P | 0016020 | cellular_component | membrane |
| P | 0020037 | molecular_function | heme binding |
| P | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| P | 0042651 | cellular_component | thylakoid membrane |
| P | 0046872 | molecular_function | metal ion binding |
| Q | 0004497 | molecular_function | monooxygenase activity |
| Q | 0009496 | molecular_function | plastoquinol--plastocyanin reductase activity |
| Q | 0009579 | cellular_component | thylakoid |
| Q | 0015979 | biological_process | photosynthesis |
| Q | 0016020 | cellular_component | membrane |
| Q | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| Q | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| Q | 0046872 | molecular_function | metal ion binding |
| Q | 0051536 | molecular_function | iron-sulfur cluster binding |
| Q | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| Q | 0055085 | biological_process | transmembrane transport |
| R | 0009055 | molecular_function | electron transfer activity |
| R | 0009512 | cellular_component | cytochrome b6f complex |
| R | 0009579 | cellular_component | thylakoid |
| R | 0015979 | biological_process | photosynthesis |
| R | 0016020 | cellular_component | membrane |
| R | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| R | 0042651 | cellular_component | thylakoid membrane |
| S | 0009055 | molecular_function | electron transfer activity |
| S | 0009512 | cellular_component | cytochrome b6f complex |
| S | 0009579 | cellular_component | thylakoid |
| S | 0015979 | biological_process | photosynthesis |
| S | 0016020 | cellular_component | membrane |
| S | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| S | 0042651 | cellular_component | thylakoid membrane |
| T | 0009512 | cellular_component | cytochrome b6f complex |
| T | 0009579 | cellular_component | thylakoid |
| T | 0015979 | biological_process | photosynthesis |
| T | 0016020 | cellular_component | membrane |
| T | 0017004 | biological_process | cytochrome complex assembly |
| T | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| T | 0042651 | cellular_component | thylakoid membrane |
| U | 0009055 | molecular_function | electron transfer activity |
| U | 0009512 | cellular_component | cytochrome b6f complex |
| U | 0009579 | cellular_component | thylakoid |
| U | 0015979 | biological_process | photosynthesis |
| U | 0016020 | cellular_component | membrane |
| U | 0017004 | biological_process | cytochrome complex assembly |
| U | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| U | 0042651 | cellular_component | thylakoid membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 20 |
| Details | BINDING SITE FOR RESIDUE HEM A 301 |
| Chain | Residue |
| A | PHE44 |
| A | ARG83 |
| A | HIS86 |
| A | ALA90 |
| A | MET93 |
| A | PHE131 |
| A | GLY135 |
| A | LEU138 |
| A | PRO139 |
| A | HIS187 |
| A | THR188 |
| A | GLN47 |
| N | PHE189 |
| A | PHE48 |
| A | GLY51 |
| A | PHE52 |
| A | MET54 |
| A | THR55 |
| A | TYR58 |
| A | VAL69 |
| site_id | AC2 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE HEM A 302 |
| Chain | Residue |
| A | TYR34 |
| A | GLY37 |
| A | GLY38 |
| A | LEU41 |
| A | HIS100 |
| A | ARG103 |
| A | VAL104 |
| A | GLY109 |
| A | ARG114 |
| A | TRP118 |
| A | GLY121 |
| A | VAL122 |
| A | ALA125 |
| A | THR128 |
| A | MET199 |
| A | HIS202 |
| A | LYS208 |
| A | GLN209 |
| A | HEM303 |
| site_id | AC3 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE HEM A 303 |
| Chain | Residue |
| A | ASN31 |
| A | TYR34 |
| A | CYS35 |
| A | GLY38 |
| A | LEU41 |
| A | PHE203 |
| A | ILE206 |
| A | LYS208 |
| A | HEM302 |
| A | PL9305 |
| A | HOH306 |
| B | PHE40 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE TDS A 304 |
| Chain | Residue |
| A | SER130 |
| A | THR134 |
| A | TYR183 |
| A | ALA186 |
| A | VAL190 |
| B | PHE85 |
| B | LEU88 |
| B | CLA201 |
| N | OPC1306 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PL9 A 305 |
| Chain | Residue |
| A | TYR25 |
| A | HEM303 |
| B | OPC307 |
| D | THR28 |
| D | OPC306 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE OPC D 306 |
| Chain | Residue |
| A | PHE48 |
| A | PL9305 |
| B | OPC307 |
| D | LEU35 |
| D | LEU38 |
| D | VAL39 |
| D | PHE42 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE OPC B 307 |
| Chain | Residue |
| A | LYS24 |
| A | PL9305 |
| B | ASN34 |
| B | TYR38 |
| D | GLN17 |
| D | OPC306 |
| site_id | AC8 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE CLA B 201 |
| Chain | Residue |
| A | VAL101 |
| A | TYR105 |
| A | ALA125 |
| A | TDS304 |
| B | TYR80 |
| B | PRO83 |
| B | VAL84 |
| B | MET101 |
| B | ALA102 |
| B | VAL104 |
| B | ILE132 |
| B | PHE133 |
| B | GLY136 |
| B | THR140 |
| site_id | AC9 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE HEM C 301 |
| Chain | Residue |
| C | ASN71 |
| C | VAL72 |
| C | GLY73 |
| C | ALA74 |
| C | GLY156 |
| C | ARG157 |
| C | GLY158 |
| C | ILE160 |
| C | TYR161 |
| C | TYR1 |
| C | PRO2 |
| C | ALA5 |
| C | CYS22 |
| C | CYS25 |
| C | HIS26 |
| C | GLN60 |
| site_id | BC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE FES D 200 |
| Chain | Residue |
| D | CYS108 |
| D | HIS110 |
| D | LEU111 |
| D | GLY112 |
| D | CYS113 |
| D | CYS126 |
| D | HIS129 |
| D | SER131 |
| site_id | BC2 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE BCR E 101 |
| Chain | Residue |
| A | PHE33 |
| A | ILE39 |
| B | GLY46 |
| E | ALA13 |
| E | PHE16 |
| E | GLY17 |
| E | VAL20 |
| F | ILE16 |
| F | PHE17 |
| F | TRP20 |
| G | PHE22 |
| G | ALA25 |
| site_id | BC3 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE HEM N 301 |
| Chain | Residue |
| A | PHE189 |
| N | PHE44 |
| N | GLN47 |
| N | GLY51 |
| N | PHE52 |
| N | MET54 |
| N | THR55 |
| N | VAL69 |
| N | ARG83 |
| N | HIS86 |
| N | ARG87 |
| N | MET93 |
| N | PHE131 |
| N | GLY132 |
| N | GLY135 |
| N | PRO139 |
| N | HIS187 |
| N | THR188 |
| site_id | BC4 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE HEM N 302 |
| Chain | Residue |
| N | TYR34 |
| N | GLY37 |
| N | GLY38 |
| N | MET97 |
| N | HIS100 |
| N | ARG103 |
| N | VAL104 |
| N | GLY109 |
| N | PHE110 |
| N | ARG114 |
| N | TRP118 |
| N | GLY121 |
| N | VAL122 |
| N | ALA125 |
| N | THR128 |
| N | MET199 |
| N | HIS202 |
| N | PHE203 |
| N | GLY210 |
| N | HEM303 |
| N | HOH1307 |
| site_id | BC5 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE HEM N 303 |
| Chain | Residue |
| N | TYR34 |
| N | CYS35 |
| N | GLY38 |
| N | LEU41 |
| N | THR42 |
| N | PHE203 |
| N | ILE206 |
| N | HEM302 |
| N | HOH1307 |
| O | VAL39 |
| O | PHE40 |
| O | VAL43 |
| O | ILE44 |
| Q | PL91305 |
| T | ARG31 |
| site_id | BC6 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE TDS N 1304 |
| Chain | Residue |
| N | SER130 |
| N | THR134 |
| N | VAL151 |
| N | VAL154 |
| N | LEU169 |
| N | ARG182 |
| N | TYR183 |
| N | ALA186 |
| N | VAL190 |
| N | LEU191 |
| O | PRO77 |
| O | LEU81 |
| O | LEU88 |
| O | CLA1201 |
| site_id | BC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PL9 Q 1305 |
| Chain | Residue |
| N | HEM303 |
| O | TYR38 |
| Q | PHE24 |
| Q | THR28 |
| Q | LEU38 |
| Q | OPC1307 |
| site_id | BC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE OPC N 1306 |
| Chain | Residue |
| A | LEU168 |
| A | TDS304 |
| N | LEU200 |
| Q | PHE42 |
| site_id | BC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE OPC Q 1307 |
| Chain | Residue |
| O | ASP35 |
| O | TYR38 |
| P | LYS276 |
| Q | GLN17 |
| Q | PHE24 |
| Q | PL91305 |
| site_id | CC1 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE CLA O 1201 |
| Chain | Residue |
| N | ILE98 |
| N | VAL101 |
| N | PHE102 |
| N | TDS1304 |
| O | TYR80 |
| O | PRO83 |
| O | VAL84 |
| O | ILE87 |
| O | VAL104 |
| O | PRO105 |
| O | LEU106 |
| O | ILE132 |
| O | PHE133 |
| O | GLY136 |
| O | THR140 |
| site_id | CC2 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE HEM P 301 |
| Chain | Residue |
| P | TYR1 |
| P | PRO2 |
| P | ALA5 |
| P | CYS22 |
| P | CYS25 |
| P | HIS26 |
| P | GLN60 |
| P | ASN71 |
| P | VAL72 |
| P | GLY73 |
| P | ALA74 |
| P | GLY156 |
| P | ARG157 |
| P | GLY158 |
| P | ILE160 |
| P | TYR161 |
| site_id | CC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE FES Q 1200 |
| Chain | Residue |
| Q | CYS108 |
| Q | HIS110 |
| Q | LEU111 |
| Q | GLY112 |
| Q | CYS113 |
| Q | CYS126 |
| Q | CYS128 |
| Q | HIS129 |
| Q | SER131 |
| site_id | CC4 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE BCR R 1101 |
| Chain | Residue |
| N | PHE33 |
| N | ILE39 |
| N | MET96 |
| N | LEU99 |
| R | ALA13 |
| R | PHE16 |
| R | GLY17 |
| R | VAL20 |
| S | ILE16 |
| S | PHE17 |
| S | TRP20 |
| T | PHE22 |
| T | ALA25 |
| T | GLN28 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 40 |
| Details | TRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_00395, ECO:0000305|PubMed:14526088 |
| Chain | Residue | Details |
| H | ILE3-VAL23 | |
| U | ILE3-VAL23 | |
| P | VAL45 | |
| P | LEU70 | |
| N | LYS111-GLU115 | |
| N | ARG207-LEU215 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 44 |
| Details | TRANSMEM: Helical => ECO:0000305|PubMed:14526088 |
| Chain | Residue | Details |
| D | LEU21-ILE43 | |
| Q | LEU21-ILE43 | |
| P | SER66 | |
| P | GLY69 | |
| O | LEU95-GLU115 | |
| O | THR131-LEU151 | |
| N | LEU116-TYR136 | |
| N | ALA186-ILE206 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 270 |
| Details | TOPO_DOM: Lumenal, thylakoid => ECO:0000305|PubMed:14526088 |
| Chain | Residue | Details |
| D | PRO44-VAL179 | |
| Q | PRO44-VAL179 | |
| O | LEU57-LYS94 | |
| O | ASP152-PHE160 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:14526088 |
| Chain | Residue | Details |
| D | CYS108 | |
| D | HIS110 | |
| D | CYS126 | |
| D | HIS129 | |
| Q | CYS108 | |
| Q | HIS110 | |
| Q | CYS126 | |
| Q | HIS129 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:14526088, ECO:0000269|PubMed:16371475, ECO:0007744|PDB:1VF5, ECO:0007744|PDB:2D2C |
| Chain | Residue | Details |
| A | ARG83 | |
| N | ARG83 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 8 |
| Details | BINDING: axial binding residue => ECO:0000269|PubMed:14526088, ECO:0000269|PubMed:16371475, ECO:0007744|PDB:1VF5, ECO:0007744|PDB:2D2C |
| Chain | Residue | Details |
| A | HIS86 | |
| A | HIS100 | |
| A | HIS187 | |
| A | HIS202 | |
| N | HIS86 | |
| N | HIS100 | |
| N | HIS187 | |
| N | HIS202 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:14526088, ECO:0007744|PDB:1VF5 |
| Chain | Residue | Details |
| A | ARG103 | |
| A | LYS208 | |
| N | ARG103 | |
| N | LYS208 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ndo |
| Chain | Residue | Details |
| Q | HIS129 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ndo |
| Chain | Residue | Details |
| D | HIS129 |
