Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VEY

Crystal Structure of Peptide Deformylase from Leptospira Interrogans (LiPDF) at pH7.0

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0043686biological_processco-translational protein modification
A0046872molecular_functionmetal ion binding
B0006412biological_processtranslation
B0016787molecular_functionhydrolase activity
B0042586molecular_functionpeptide deformylase activity
B0043686biological_processco-translational protein modification
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 1513
ChainResidue
AGLN53
ACYS101
AHIS143
AHIS147
AHOH1717

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 2514
ChainResidue
BCYS101
BHIS143
BHIS147
BHOH2718

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE EPE A 1716
ChainResidue
AGLY46
AVAL47
AGLY48
AARG70
ATYR71
APHE97
ATRP98
AGLU99
AGLY100
ACYS101
ALEU102
ATYR136
AGLU144
AHOH1717

site_idAC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE EPE B 2717
ChainResidue
BGLY46
BVAL47
BGLY48
BTYR71
BPHE97
BGLU99
BGLY100
BCYS101
BLEU102
BTYR136
BHIS143
BGLU144
BHOH2718

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AGLU144
BGLU144

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ACYS101
AHIS143
AHIS147
BCYS101
BHIS143
BHIS147

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1bs4
ChainResidueDetails
ALEU102
AGLY48
AGLN53
AGLU144

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1bs4
ChainResidueDetails
BLEU102
BGLY48
BGLN53
BGLU144

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon