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1V1B

2-KETO-3-DEOXYGLUCONATE KINASE FROM THERMUS THERMOPHILUS WITH BOUND ATP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0008673molecular_function2-dehydro-3-deoxygluconokinase activity
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
A0046835biological_processcarbohydrate phosphorylation
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0008673molecular_function2-dehydro-3-deoxygluconokinase activity
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0016740molecular_functiontransferase activity
B0046835biological_processcarbohydrate phosphorylation
C0000166molecular_functionnucleotide binding
C0005524molecular_functionATP binding
C0008673molecular_function2-dehydro-3-deoxygluconokinase activity
C0016301molecular_functionkinase activity
C0016310biological_processphosphorylation
C0016740molecular_functiontransferase activity
C0046835biological_processcarbohydrate phosphorylation
D0000166molecular_functionnucleotide binding
D0005524molecular_functionATP binding
D0008673molecular_function2-dehydro-3-deoxygluconokinase activity
D0016301molecular_functionkinase activity
D0016310biological_processphosphorylation
D0016740molecular_functiontransferase activity
D0046835biological_processcarbohydrate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ATP A1301
ChainResidue
AASN165
AGLY248
AALA249
AGLY250
AASP251
APHE253
AASN275
AALA279
ASER193
ALYS219
AGLY221
AGLY224
AALA238
APHE239
AVAL241
APRO246

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP B1301
ChainResidue
BLYS219
BGLY221
BGLY224
BALA238
BPHE239
BVAL241
BPRO246
BGLY248
BALA249
BGLY250
BASP251
BPHE253
BASN275
BALA279
BHOH2030

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP C1301
ChainResidue
CSER193
CLYS219
CGLY221
CGLY224
CALA238
CPHE239
CVAL241
CPRO246
CGLY248
CALA249
CGLY250
CASP251
CPHE253
CASN275
CALA279

site_idAC4
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ATP D1301
ChainResidue
DLYS219
DGLY221
DGLY224
DALA238
DPHE239
DVAL241
DPRO246
DGLY248
DALA249
DGLY250
DASP251
DPHE253
DASN275
DALA279
DHOH2018
DHOH2019

Functional Information from PROSITE/UniProt
site_idPS00584
Number of Residues14
DetailsPFKB_KINASES_2 pfkB family of carbohydrate kinases signature 2. DPvGAGDafaAGYL
ChainResidueDetails
AASP245-LEU258

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"15210349","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues80
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15210349","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q97U29","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
AGLY248
AALA249
AASP251
AGLY250

site_idCSA10
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
BARG100
BASP251

site_idCSA11
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
CARG100
CASP251

site_idCSA12
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
DARG100
DASP251

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
BGLY248
BALA249
BASP251
BGLY250

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
CGLY248
CALA249
CASP251
CGLY250

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
DGLY248
DALA249
DASP251
DGLY250

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
AGLY248
ALYS219

site_idCSA6
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
BGLY248
BLYS219

site_idCSA7
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
CGLY248
CLYS219

site_idCSA8
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
DGLY248
DLYS219

site_idCSA9
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lio
ChainResidueDetails
AARG100
AASP251

244349

PDB entries from 2025-11-05

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