Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005509 | molecular_function | calcium ion binding |
A | 0005515 | molecular_function | protein binding |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0009279 | cellular_component | cell outer membrane |
A | 0015288 | molecular_function | porin activity |
A | 0015420 | molecular_function | ABC-type vitamin B12 transporter activity |
A | 0015889 | biological_process | cobalamin transport |
A | 0016020 | cellular_component | membrane |
A | 0019904 | molecular_function | protein domain specific binding |
A | 0034220 | biological_process | monoatomic ion transmembrane transport |
A | 0035461 | biological_process | vitamin transmembrane transport |
A | 0046872 | molecular_function | metal ion binding |
A | 0046930 | cellular_component | pore complex |
A | 0090482 | molecular_function | vitamin transmembrane transporter activity |
A | 1902495 | cellular_component | transmembrane transporter complex |
Functional Information from PROSITE/UniProt
site_id | PS01156 |
Number of Residues | 18 |
Details | TONB_DEPENDENT_REC_2 TonB-dependent receptor (TBDR) proteins signature 2. YgyqTaGReYtLSGsYtF |
Chain | Residue | Details |
A | TYR577-PHE594 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 278 |
Details | Transmembrane: {"description":"Beta stranded"} |
site_id | SWS_FT_FI2 |
Number of Residues | 86 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 32 |
Details | Topological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI4 |
Number of Residues | 114 |
Details | Domain: {"description":"TBDR plug","evidences":[{"source":"PROSITE-ProRule","id":"PRU01360","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI5 |
Number of Residues | 7 |
Details | Motif: {"description":"TonB box"} |
site_id | SWS_FT_FI6 |
Number of Residues | 17 |
Details | Motif: {"description":"TonB C-terminal box"} |
site_id | SWS_FT_FI7 |
Number of Residues | 8 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1NQH","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI8 |
Number of Residues | 5 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"12652322","evidenceCode":"ECO:0000269"}]} |
site_id | SWS_FT_FI9 |
Number of Residues | 6 |
Details | Motif: {"description":"Hairpin","evidences":[{"source":"PubMed","id":"11741540","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"14528295","evidenceCode":"ECO:0000305"}]} |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | |
Details | M-CSA 530 |