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1UDS

Crystal structure of the tRNA processing enzyme RNase PH R126A mutant from Aquifex aeolicus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000175molecular_function3'-5'-RNA exonuclease activity
A0003723molecular_functionRNA binding
A0006364biological_processrRNA processing
A0008033biological_processtRNA processing
A0009022molecular_functiontRNA nucleotidyltransferase activity
A0016075biological_processrRNA catabolic process
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0031125biological_processrRNA 3'-end processing
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 701
ChainResidue
AGLY124
ATHR125
AALA126
AASN188
AHOH952
AHOH997

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 910
ChainResidue
ATHR105
ALYS156
AVAL102
AGLU103
ALEU104

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 911
ChainResidue
ATRP58
ATHR60
AARG99
AHOH988

Functional Information from PROSITE/UniProt
site_idPS01277
Number of Residues14
DetailsRIBONUCLEASE_PH Ribonuclease PH signature. CDVIQADGGtatAA
ChainResidueDetails
ACYS116-ALA129

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00564","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00564","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12746447","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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