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1UDQ

Crystal structure of the tRNA processing enzyme RNase PH T125A mutant from Aquifex aeolicus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000175molecular_function3'-5'-RNA exonuclease activity
A0003723molecular_functionRNA binding
A0006364biological_processrRNA processing
A0008033biological_processtRNA processing
A0009022molecular_functiontRNA nucleotidyltransferase activity
A0016075biological_processrRNA catabolic process
A0016779molecular_functionnucleotidyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 701
ChainResidue
AGLY123
AGLY124
AALA125
AARG126
AHOH927
AHOH973

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 910
ChainResidue
ATHR105
ALYS156
AVAL102
AGLU103
ALEU104

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 911
ChainResidue
ATHR60
AARG99

Functional Information from PROSITE/UniProt
site_idPS01277
Number of Residues14
DetailsRIBONUCLEASE_PH Ribonuclease PH signature. CDVIQADGGartAA
ChainResidueDetails
ACYS116-ALA129

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00564
ChainResidueDetails
AARG86

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00564, ECO:0000269|PubMed:12746447
ChainResidueDetails
AGLY124

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PDB entries from 2024-07-17

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