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1UB3

Crystal Structure of Tetrameric Structure of Aldolase from thermus thermophilus HB8

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004139molecular_functiondeoxyribose-phosphate aldolase activity
A0005737cellular_componentcytoplasm
A0009264biological_processdeoxyribonucleotide catabolic process
A0016052biological_processcarbohydrate catabolic process
A0016829molecular_functionlyase activity
A0046386biological_processdeoxyribose phosphate catabolic process
B0003824molecular_functioncatalytic activity
B0004139molecular_functiondeoxyribose-phosphate aldolase activity
B0005737cellular_componentcytoplasm
B0009264biological_processdeoxyribonucleotide catabolic process
B0016052biological_processcarbohydrate catabolic process
B0016829molecular_functionlyase activity
B0046386biological_processdeoxyribose phosphate catabolic process
C0003824molecular_functioncatalytic activity
C0004139molecular_functiondeoxyribose-phosphate aldolase activity
C0005737cellular_componentcytoplasm
C0009264biological_processdeoxyribonucleotide catabolic process
C0016052biological_processcarbohydrate catabolic process
C0016829molecular_functionlyase activity
C0046386biological_processdeoxyribose phosphate catabolic process
D0003824molecular_functioncatalytic activity
D0004139molecular_functiondeoxyribose-phosphate aldolase activity
D0005737cellular_componentcytoplasm
D0009264biological_processdeoxyribonucleotide catabolic process
D0016052biological_processcarbohydrate catabolic process
D0016829molecular_functionlyase activity
D0046386biological_processdeoxyribose phosphate catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HPD A 801
ChainResidue
ALEU12
AARG186
AGLY203
ATHR204
ASER205
AHOH810
AHOH815
AHOH834
AHOH853
AHOH895
ACYS37
AVAL60
ALYS151
ATHR154
AGLY155
AALA182
AGLY183
AGLY184

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HPD B 802
ChainResidue
BLEU12
BCYS37
BVAL60
BASP89
BLYS151
BTHR154
BALA182
BGLY183
BGLY184
BARG186
BGLY203
BTHR204
BSER205
BHOH815
BHOH828
BHOH838
BHOH881

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HPD C 803
ChainResidue
CLEU12
CCYS37
CVAL60
CLYS151
CTHR154
CGLY155
CALA182
CGLY183
CGLY184
CARG186
CGLY203
CTHR204
CSER205
CHOH812
CHOH814
CHOH837
CHOH858
CHOH898

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HPD D 804
ChainResidue
DLEU12
DCYS37
DVAL60
DASP89
DLYS151
DTHR154
DALA182
DGLY183
DGLY184
DARG186
DGLY203
DTHR204
DSER205
DHOH812
DHOH824
DHOH832
DHOH840

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00114, ECO:0000305|PubMed:15388928
ChainResidueDetails
AASP89
ALYS180
BASP89
BLYS180
CASP89
CLYS180
DASP89
DLYS180

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00114, ECO:0000305|PubMed:15388928
ChainResidueDetails
ALYS151
BLYS151
CLYS151
DLYS151

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PDB entries from 2024-03-27

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