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1U3U

Crystal Structure of Human Alcohol Dehydrogenase Beta-1-Beta-1 Isoform Complexed with N-Benzylformamide Determined to 1.6 Angstrom Resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0001523biological_processretinoid metabolic process
A0004022molecular_functionalcohol dehydrogenase (NAD+) activity
A0004745molecular_functionall-trans-retinol dehydrogenase (NAD+) activity
A0005515molecular_functionprotein binding
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006629biological_processlipid metabolic process
A0008270molecular_functionzinc ion binding
A0016491molecular_functionoxidoreductase activity
A0042572biological_processretinol metabolic process
A0042573biological_processretinoic acid metabolic process
A0046872molecular_functionmetal ion binding
B0001523biological_processretinoid metabolic process
B0004022molecular_functionalcohol dehydrogenase (NAD+) activity
B0004745molecular_functionall-trans-retinol dehydrogenase (NAD+) activity
B0005515molecular_functionprotein binding
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006629biological_processlipid metabolic process
B0008270molecular_functionzinc ion binding
B0016491molecular_functionoxidoreductase activity
B0042572biological_processretinol metabolic process
B0042573biological_processretinoic acid metabolic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 375
ChainResidue
ACYS97
ACYS100
ACYS103
ACYS111

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 376
ChainResidue
ACYS46
AHIS67
ACYS174
ANAD1377
ABNF1378

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 375
ChainResidue
BCYS97
BCYS100
BCYS103
BCYS111

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 376
ChainResidue
BCYS46
BHIS67
BCYS174
BNAD2377
BBNF2378

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 400
ChainResidue
ASER1
ALYS5
AHOH1613
AHOH1725
BTHR127
BARG128
BHOH2483
BHOH2545
BHOH2817

site_idAC6
Number of Residues36
DetailsBINDING SITE FOR RESIDUE NAD A 1377
ChainResidue
AARG47
ATHR48
AHIS51
APHE93
ACYS174
ATHR178
AGLY199
ALEU200
AGLY201
AGLY202
AVAL203
AASP223
AILE224
ALYS228
AVAL268
AILE269
AARG271
AVAL292
AGLY293
AVAL294
AALA317
AVAL318
ATYR319
ALEU362
AARG369
AZN376
ABNF1378
AHOH1397
AHOH1413
AHOH1425
AHOH1426
AHOH1448
AHOH1471
AHOH1515
AHOH1719
AHOH1839

site_idAC7
Number of Residues34
DetailsBINDING SITE FOR RESIDUE NAD B 2377
ChainResidue
BARG47
BTHR48
BHIS51
BPHE93
BCYS174
BTHR178
BGLY199
BLEU200
BGLY201
BGLY202
BVAL203
BASP223
BILE224
BLYS228
BVAL268
BILE269
BARG271
BVAL292
BVAL294
BALA317
BVAL318
BTYR319
BLEU362
BARG369
BZN376
BBNF2378
BHOH2428
BHOH2446
BHOH2470
BHOH2476
BHOH2491
BHOH2503
BHOH2579
BHOH2873

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BNF A 1378
ChainResidue
AHIS67
APHE93
ACYS174
AZN376
ANAD1377
ACYS46
ATHR48

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE BNF B 2378
ChainResidue
BCYS46
BTHR48
BHIS67
BPHE93
BLEU116
BCYS174
BZN376
BNAD2377

Functional Information from PROSITE/UniProt
site_idPS00059
Number of Residues15
DetailsADH_ZINC Zinc-containing alcohol dehydrogenases signature. GHEaAGIvesvGegV
ChainResidueDetails
AGLY66-VAL80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBINDING:
ChainResidueDetails
AARG47
APHE229
AGLY293
ATHR370
BARG47
BGLU68
BGLY98
BARG101
BLYS104
BLEU112
BGLY175
AGLU68
BLEU200
BILE224
BPHE229
BGLY293
BTHR370
AGLY98
AARG101
ALYS104
ALEU112
AGLY175
ALEU200
AILE224

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylserine => ECO:0000269|PubMed:6391920
ChainResidueDetails
ATHR2
BTHR2

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
AILE23
BILE23

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:24275569
ChainResidueDetails
AGLU35
BGLU35

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
ATHR48
AARG47

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
BTHR48
BARG47

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
ALEU57

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
BLEU57

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
ATHR48
AHIS51

site_idCSA6
Number of Residues2
DetailsAnnotated By Reference To The Literature 1teh
ChainResidueDetails
BTHR48
BHIS51

224931

PDB entries from 2024-09-11

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