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1TRG

E. COLI THYMIDYLATE SYNTHASE IN SYMMETRIC COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003723molecular_functionRNA binding
A0004799molecular_functionthymidylate synthase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006231biological_processdTMP biosynthetic process
A0006235biological_processdTTP biosynthetic process
A0006417biological_processregulation of translation
A0008168molecular_functionmethyltransferase activity
A0009165biological_processnucleotide biosynthetic process
A0009314biological_processresponse to radiation
A0016741molecular_functiontransferase activity, transferring one-carbon groups
A0032259biological_processmethylation
A0042803molecular_functionprotein homodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UMP A 565
ChainResidue
AASP169
AASN177
AHIS207
ATYR209
ACB3566
AHOH708
AHOH729
AARG21
AARG126
AARG127
ACYS146
AHIS147
AGLN165
AARG166
ASER167

site_idAC2
Number of Residues23
DetailsBINDING SITE FOR RESIDUE CB3 A 566
ChainResidue
AHIS51
AGLU58
AILE79
ATRP80
ATRP83
ALEU143
AASP169
AGLY173
APHE176
AASN177
ATYR209
AVAL262
AALA263
AUMP565
AHOH715
AHOH717
AHOH720
AHOH722
AHOH724
AHOH728
AHOH738
AHOH739
AHOH811

site_idCAT
Number of Residues1
DetailsCATALYTIC CYSTEINE FORMS A COVALENT BOND WITH THE SUBSTRATE, DUMP.
ChainResidue
ACYS146

Functional Information from PROSITE/UniProt
site_idPS00091
Number of Residues29
DetailsTHYMIDYLATE_SYNTHASE Thymidylate synthase active site. RriIvsaWNvgeldkma.....LaPCHaffQFyV
ChainResidueDetails
AARG126-VAL154

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_00008, ECO:0000269|PubMed:2223754, ECO:0000269|PubMed:8973201, ECO:0000269|PubMed:9416600
ChainResidueDetails
ACYS146

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: in other chain => ECO:0000269|PubMed:2223754, ECO:0000269|PubMed:8973201, ECO:0007744|PDB:1KCE, ECO:0007744|PDB:2TSC
ChainResidueDetails
AARG21
AARG166
AASN177
AHIS207

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:8312270, ECO:0007744|PDB:1TYS
ChainResidueDetails
AHIS51
AASP169
AALA263

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:2223754, ECO:0000269|PubMed:8973201, ECO:0007744|PDB:1KCE, ECO:0007744|PDB:2TSC
ChainResidueDetails
AARG126

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1b02
ChainResidueDetails
ASER180
AASN177
ACYS146

site_idCSA2
Number of Residues6
DetailsAnnotated By Reference To The Literature 1b02
ChainResidueDetails
AHIS207
AGLU58
AASP169
ASER167
ACYS146
AASP205

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PDB entries from 2024-11-06

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