1TQJ
Crystal structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 angstrom resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
A | 0005829 | cellular_component | cytosol |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006098 | biological_process | pentose-phosphate shunt |
A | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
A | 0016853 | molecular_function | isomerase activity |
A | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
A | 0019323 | biological_process | pentose catabolic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
B | 0005829 | cellular_component | cytosol |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006098 | biological_process | pentose-phosphate shunt |
B | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
B | 0016853 | molecular_function | isomerase activity |
B | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
B | 0019323 | biological_process | pentose catabolic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
C | 0005829 | cellular_component | cytosol |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0006098 | biological_process | pentose-phosphate shunt |
C | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
C | 0016853 | molecular_function | isomerase activity |
C | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
C | 0019323 | biological_process | pentose catabolic process |
C | 0046872 | molecular_function | metal ion binding |
D | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
D | 0005829 | cellular_component | cytosol |
D | 0005975 | biological_process | carbohydrate metabolic process |
D | 0006098 | biological_process | pentose-phosphate shunt |
D | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
D | 0016853 | molecular_function | isomerase activity |
D | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
D | 0019323 | biological_process | pentose catabolic process |
D | 0046872 | molecular_function | metal ion binding |
E | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
E | 0005829 | cellular_component | cytosol |
E | 0005975 | biological_process | carbohydrate metabolic process |
E | 0006098 | biological_process | pentose-phosphate shunt |
E | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
E | 0016853 | molecular_function | isomerase activity |
E | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
E | 0019323 | biological_process | pentose catabolic process |
E | 0046872 | molecular_function | metal ion binding |
F | 0004750 | molecular_function | D-ribulose-phosphate 3-epimerase activity |
F | 0005829 | cellular_component | cytosol |
F | 0005975 | biological_process | carbohydrate metabolic process |
F | 0006098 | biological_process | pentose-phosphate shunt |
F | 0009052 | biological_process | pentose-phosphate shunt, non-oxidative branch |
F | 0016853 | molecular_function | isomerase activity |
F | 0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives |
F | 0019323 | biological_process | pentose catabolic process |
F | 0046872 | molecular_function | metal ion binding |
Functional Information from PROSITE/UniProt
site_id | PS01085 |
Number of Residues | 15 |
Details | RIBUL_P_3_EPIMER_1 Ribulose-phosphate 3-epimerase family signature 1. IHVDVmDgrFVpNiT |
Chain | Residue | Details |
A | ILE34-THR48 |
site_id | PS01086 |
Number of Residues | 23 |
Details | RIBUL_P_3_EPIMER_2 Ribulose-phosphate 3-epimerase family signature 2. IlIMSVnPgfgGQsFipevlpKI |
Chain | Residue | Details |
A | ILE138-ILE160 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | ACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_02227 |
Chain | Residue | Details |
A | ASP37 | |
B | ASP37 | |
C | ASP37 | |
D | ASP37 | |
E | ASP37 | |
F | ASP37 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_02227 |
Chain | Residue | Details |
A | ASP179 | |
B | ASP179 | |
C | ASP179 | |
D | ASP179 | |
E | ASP179 | |
F | ASP179 |
site_id | SWS_FT_FI3 |
Number of Residues | 42 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_02227 |
Chain | Residue | Details |
A | SER10 | |
B | ASP37 | |
B | HIS68 | |
B | GLY146 | |
B | ASP179 | |
B | GLY201 | |
C | SER10 | |
C | HIS35 | |
C | ASP37 | |
C | HIS68 | |
C | GLY146 | |
A | HIS35 | |
C | ASP179 | |
C | GLY201 | |
D | SER10 | |
D | HIS35 | |
D | ASP37 | |
D | HIS68 | |
D | GLY146 | |
D | ASP179 | |
D | GLY201 | |
E | SER10 | |
A | ASP37 | |
E | HIS35 | |
E | ASP37 | |
E | HIS68 | |
E | GLY146 | |
E | ASP179 | |
E | GLY201 | |
F | SER10 | |
F | HIS35 | |
F | ASP37 | |
F | HIS68 | |
A | HIS68 | |
F | GLY146 | |
F | ASP179 | |
F | GLY201 | |
A | GLY146 | |
A | ASP179 | |
A | GLY201 | |
B | SER10 | |
B | HIS35 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
F | LYS24 |
site_id | CSA10 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
D | ASP179 | |
D | HIS68 | |
D | HIS35 | |
D | ASP37 |
site_id | CSA11 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
E | ASP179 | |
E | HIS68 | |
E | HIS35 | |
E | ASP37 |
site_id | CSA12 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
F | ASP179 | |
F | HIS68 | |
F | HIS35 | |
F | ASP37 |
site_id | CSA13 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | ASN120 |
site_id | CSA14 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | ASN120 |
site_id | CSA15 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
C | ASN120 |
site_id | CSA16 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
D | ASN120 |
site_id | CSA17 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
E | ASN120 |
site_id | CSA18 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
F | ASN120 |
site_id | CSA19 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | HIS68 | |
A | ASP66 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | LYS24 |
site_id | CSA20 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | HIS68 | |
B | ASP66 |
site_id | CSA21 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
C | HIS68 | |
C | ASP66 |
site_id | CSA22 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
D | HIS68 | |
D | ASP66 |
site_id | CSA23 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
E | HIS68 | |
E | ASP66 |
site_id | CSA24 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
F | HIS68 | |
F | ASP66 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | LYS24 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
C | LYS24 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
D | LYS24 |
site_id | CSA6 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
E | LYS24 |
site_id | CSA7 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | ASP179 | |
A | HIS68 | |
A | HIS35 | |
A | ASP37 |
site_id | CSA8 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | ASP179 | |
B | HIS68 | |
B | HIS35 | |
B | ASP37 |
site_id | CSA9 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
C | ASP179 | |
C | HIS68 | |
C | HIS35 | |
C | ASP37 |