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1TMN

Binding of n-carboxymethyl dipeptide inhibitors to thermolysin determined by x-ray crystallography. a novel class of transition-state analogues for zinc peptidases

Functional Information from GO Data
ChainGOidnamespacecontents
E0004222molecular_functionmetalloendopeptidase activity
E0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 0ZN E 317
ChainResidue
ETYR110
EGLU166
ELEU202
EARG203
EHIS231
EZN322
EHOH362
EASN111
EASN112
EALA113
EVAL139
EHIS142
EGLU143
EHIS146
ETYR157

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA E 318
ChainResidue
EASP138
EGLU177
EASP185
EGLU187
EGLU190
EHOH346

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA E 319
ChainResidue
EGLU177
EASN183
EASP185
EGLU190
EHOH353
EHOH475

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA E 320
ChainResidue
EASP57
EASP59
EGLN61
EHOH419
EHOH482

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA E 321
ChainResidue
ETYR193
ETHR194
EILE197
EASP200
EHOH354
EHOH480

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN E 322
ChainResidue
EHIS142
EHIS146
EGLU166
E0ZN317

site_idS1
Number of Residues1
DetailsSUBSITE 1 OF THE ACTIVE SITE CLEFT OF THERMOLYSIN
ChainResidue
EPHE114

site_idS1P
Number of Residues7
DetailsSUBSITE 2 OF THE ACTIVE SITE CLEFT OF THERMOLYSIN
ChainResidue
EPHE130
ELEU133
EVAL139
EILE188
EGLY189
EVAL192
ELEU202

site_idS2
Number of Residues1
DetailsSUBSITE 3 OF THE ACTIVE SITE CLEFT OF THERMOLYSIN
ChainResidue
ETRP115

site_idS2P
Number of Residues2
DetailsSUBSITE 4 OF THE ACTIVE SITE CLEFT OF THERMOLYSIN
ChainResidue
EPHE130
ELEU202

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VVAHELTHAV
ChainResidueDetails
EVAL139-VAL148

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"4808703","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10095","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"4808703","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1tlp
ChainResidueDetails
EHIS231
EGLU143

site_idMCSA1
Number of Residues7
DetailsM-CSA 176
ChainResidueDetails

246704

PDB entries from 2025-12-24

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