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1TGZ

Structure of human Senp2 in complex with SUMO-1

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 300
ChainResidue
AALA392
APHE393
ALYS394
AARG396

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
AARG475
ALYS476

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
ALYS535
AHIS537
AHOH57
ALYS488
ALYS492

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
APRO384
AGLN385
AASP386

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 304
ChainResidue
AARG396
BALA72
BASP73
BASN74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Interaction with PIAS2
ChainResidueDetails
BPHE36
AASP495

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
BSER32

site_idSWS_FT_FI3
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
BLYS23
BLYS39
BLYS45
BLYS46

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000269|PubMed:27068747
ChainResidueDetails
BGLY97

site_idSWS_FT_FI5
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)
ChainResidueDetails
BLYS25

site_idSWS_FT_FI6
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
BLYS37

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 2bkr
ChainResidueDetails
ATRP479
ATRP410
AASP495
AHIS478
ACYS548

223532

PDB entries from 2024-08-07

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