1TFY
How CCA is added to the 3' end of immature tRNA without the use of an oligonucleotide template
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000049 | molecular_function | tRNA binding |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
A | 0003723 | molecular_function | RNA binding |
A | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0008033 | biological_process | tRNA processing |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0031123 | biological_process | RNA 3'-end processing |
A | 0042245 | biological_process | RNA repair |
A | 0046872 | molecular_function | metal ion binding |
A | 0106354 | biological_process | tRNA surveillance |
A | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
B | 0000049 | molecular_function | tRNA binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
B | 0003723 | molecular_function | RNA binding |
B | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0008033 | biological_process | tRNA processing |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0031123 | biological_process | RNA 3'-end processing |
B | 0042245 | biological_process | RNA repair |
B | 0046872 | molecular_function | metal ion binding |
B | 0106354 | biological_process | tRNA surveillance |
B | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
C | 0000049 | molecular_function | tRNA binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
C | 0003723 | molecular_function | RNA binding |
C | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0008033 | biological_process | tRNA processing |
C | 0016779 | molecular_function | nucleotidyltransferase activity |
C | 0031123 | biological_process | RNA 3'-end processing |
C | 0042245 | biological_process | RNA repair |
C | 0046872 | molecular_function | metal ion binding |
C | 0106354 | biological_process | tRNA surveillance |
C | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
D | 0000049 | molecular_function | tRNA binding |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0001680 | biological_process | tRNA 3'-terminal CCA addition |
D | 0003723 | molecular_function | RNA binding |
D | 0004810 | molecular_function | CCA tRNA nucleotidyltransferase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0008033 | biological_process | tRNA processing |
D | 0016779 | molecular_function | nucleotidyltransferase activity |
D | 0031123 | biological_process | RNA 3'-end processing |
D | 0042245 | biological_process | RNA repair |
D | 0046872 | molecular_function | metal ion binding |
D | 0106354 | biological_process | tRNA surveillance |
D | 0160016 | molecular_function | CCACCA tRNA nucleotidyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG A 601 |
Chain | Residue |
A | SER47 |
A | ASP61 |
A | CTP501 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG B 602 |
Chain | Residue |
B | SER47 |
B | GLU59 |
B | ASP61 |
B | CTP502 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG C 603 |
Chain | Residue |
C | ASP61 |
C | CTP503 |
C | SER47 |
C | GLU59 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG D 604 |
Chain | Residue |
D | SER47 |
D | GLU59 |
D | ASP61 |
D | CTP504 |
site_id | AC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE CTP A 501 |
Chain | Residue |
A | GLY46 |
A | SER47 |
A | ARG50 |
A | ASP61 |
A | THR130 |
A | HIS133 |
A | TYR161 |
A | SER171 |
A | MG601 |
J | C68 |
site_id | AC6 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE CTP B 502 |
Chain | Residue |
B | GLY46 |
B | SER47 |
B | ARG50 |
B | GLU59 |
B | ASP61 |
B | THR130 |
B | HIS133 |
B | LYS152 |
B | TYR161 |
B | ARG224 |
B | MG602 |
H | A73 |
H | C74 |
site_id | AC7 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CTP C 503 |
Chain | Residue |
C | GLY46 |
C | SER47 |
C | ARG50 |
C | GLU59 |
C | ASP61 |
C | THR130 |
C | HIS133 |
C | TYR161 |
C | ARG224 |
C | MG603 |
G | A12 |
G | C13 |
site_id | AC8 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE CTP D 504 |
Chain | Residue |
D | GLY46 |
D | SER47 |
D | ARG50 |
D | GLU59 |
D | ASP61 |
D | THR130 |
D | HIS133 |
D | LYS152 |
D | TYR161 |
D | TYR173 |
D | ARG224 |
D | MG604 |
I | A73 |
I | C74 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0000269|PubMed:14636575, ECO:0000269|PubMed:25640237, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEU, ECO:0007744|PDB:4X4O, ECO:0007744|PDB:4X4Q, ECO:0007744|PDB:4X4S |
Chain | Residue | Details |
A | SER47 | |
B | SER47 | |
C | SER47 | |
D | SER47 |
site_id | SWS_FT_FI2 |
Number of Residues | 16 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0000269|PubMed:14636575, ECO:0000269|PubMed:25640237, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEU, ECO:0007744|PDB:4X4Q, ECO:0007744|PDB:4X4S |
Chain | Residue | Details |
A | ARG50 | |
C | HIS133 | |
C | LYS152 | |
C | TYR161 | |
D | ARG50 | |
D | HIS133 | |
D | LYS152 | |
D | TYR161 | |
A | HIS133 | |
A | LYS152 | |
A | TYR161 | |
B | ARG50 | |
B | HIS133 | |
B | LYS152 | |
B | TYR161 | |
C | ARG50 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0007744|PDB:1UEV |
Chain | Residue | Details |
A | GLU59 | |
B | GLU59 | |
C | GLU59 | |
D | GLU59 |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000269|PubMed:14592988, ECO:0007744|PDB:1R89, ECO:0007744|PDB:1UEV |
Chain | Residue | Details |
A | ASP61 | |
A | ASP110 | |
B | ASP61 | |
B | ASP110 | |
C | ASP61 | |
C | ASP110 | |
D | ASP61 | |
D | ASP110 |