Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003911 | molecular_function | DNA ligase (NAD+) activity |
B | 0003911 | molecular_function | DNA ligase (NAD+) activity |
C | 0003911 | molecular_function | DNA ligase (NAD+) activity |
D | 0003911 | molecular_function | DNA ligase (NAD+) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 405 |
Chain | Residue |
A | TYR30 |
A | LEU124 |
A | ALA125 |
A | ARG141 |
A | ARG202 |
A | HOH416 |
A | HOH453 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 406 |
Chain | Residue |
A | ARG129 |
A | ARG137 |
A | LYS79 |
A | PRO81 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 407 |
Chain | Residue |
A | ARG190 |
A | PHE198 |
A | ARG220 |
site_id | AC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 A 408 |
Chain | Residue |
A | PRO81 |
A | HIS82 |
A | ASP83 |
A | SER127 |
A | ARG129 |
A | ARG137 |
A | GLU171 |
A | ARG173 |
A | HOH415 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 409 |
Chain | Residue |
A | SER26 |
A | TYR30 |
A | TYR42 |
A | ARG68 |
A | LYS306 |
A | NAD401 |
A | HOH413 |
A | HOH422 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 C 410 |
Chain | Residue |
C | THR304 |
C | ARG309 |
C | HOH445 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 411 |
Chain | Residue |
A | ARG14 |
B | TRP268 |
B | HIS275 |
B | TYR314 |
site_id | AC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 B 412 |
Chain | Residue |
B | TYR30 |
B | LEU124 |
B | ALA125 |
B | ARG141 |
B | ARG202 |
B | HOH537 |
B | HOH566 |
B | HOH575 |
B | HOH581 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 413 |
Chain | Residue |
B | ARG129 |
B | ARG137 |
B | HOH561 |
B | HOH577 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 B 415 |
Chain | Residue |
B | HIS82 |
B | ASP83 |
B | SER127 |
B | ARG129 |
B | ARG137 |
B | GLU171 |
B | ARG173 |
B | HOH555 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 417 |
Chain | Residue |
A | HOH426 |
B | TYR177 |
B | PRO179 |
B | ASN223 |
B | ARG253 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 B 418 |
Chain | Residue |
B | THR304 |
B | ARG309 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 B 419 |
Chain | Residue |
A | TRP268 |
A | GLU272 |
A | HIS275 |
A | TYR314 |
B | ARG14 |
B | GLN21 |
site_id | BC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 420 |
Chain | Residue |
B | VAL160 |
B | PRO161 |
B | MET162 |
B | ARG163 |
site_id | BC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 C 421 |
Chain | Residue |
C | TYR30 |
C | LEU124 |
C | ALA125 |
C | ARG141 |
C | ARG202 |
C | HOH434 |
C | HOH457 |
site_id | BC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 C 422 |
Chain | Residue |
C | PRO81 |
C | ARG129 |
C | ARG137 |
site_id | BC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 C 423 |
Chain | Residue |
C | HIS82 |
C | ASP83 |
C | SER127 |
C | ARG129 |
C | ARG137 |
C | GLU171 |
C | ARG173 |
C | HOH430 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 424 |
Chain | Residue |
C | TRP268 |
C | GLU272 |
C | HIS275 |
C | TYR314 |
site_id | CC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 D 425 |
Chain | Residue |
D | LEU124 |
D | ALA125 |
D | ARG141 |
D | ARG202 |
D | HOH537 |
D | HOH570 |
D | TYR30 |
site_id | CC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 D 426 |
Chain | Residue |
D | ARG129 |
D | ARG137 |
site_id | CC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 D 427 |
Chain | Residue |
D | ARG190 |
D | ARG220 |
site_id | CC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 D 428 |
Chain | Residue |
D | PRO81 |
D | HIS82 |
D | ASP83 |
D | SER127 |
D | ARG129 |
D | ARG137 |
D | GLU171 |
D | ARG173 |
D | HOH556 |
site_id | CC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 D 429 |
Chain | Residue |
D | THR304 |
D | ARG309 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 D 430 |
Chain | Residue |
D | HIS275 |
D | TYR314 |
D | HOH552 |
site_id | CC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA B 531 |
Chain | Residue |
B | GLU38 |
B | ASP39 |
B | ASN200 |
site_id | CC8 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE NAD A 401 |
Chain | Residue |
A | TYR25 |
A | TYR29 |
A | TYR30 |
A | VAL37 |
A | GLU38 |
A | ASP39 |
A | TYR42 |
A | ASP43 |
A | SER88 |
A | LEU89 |
A | ASP91 |
A | GLU118 |
A | LEU119 |
A | LYS120 |
A | ILE121 |
A | ALA125 |
A | ARG141 |
A | GLU175 |
A | TYR227 |
A | VAL289 |
A | LYS291 |
A | LYS315 |
A | SO4409 |
A | HOH413 |
A | HOH416 |
site_id | CC9 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE NAD B 402 |
Chain | Residue |
B | TYR25 |
B | SER26 |
B | TYR29 |
B | TYR30 |
B | VAL37 |
B | ASP39 |
B | TYR42 |
B | ASP43 |
B | TYR87 |
B | SER88 |
B | LEU89 |
B | ASP91 |
B | GLU118 |
B | LEU119 |
B | LYS120 |
B | ILE121 |
B | ALA125 |
B | ARG141 |
B | GLU175 |
B | TYR227 |
B | VAL289 |
B | LYS291 |
B | LYS315 |
B | HOH537 |
B | HOH543 |
site_id | DC1 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE NAD C 403 |
Chain | Residue |
C | SER26 |
C | TYR29 |
C | TYR30 |
C | VAL37 |
C | GLU38 |
C | ASP39 |
C | TYR42 |
C | ASP43 |
C | SER88 |
C | LEU89 |
C | ASP91 |
C | GLU118 |
C | LEU119 |
C | LYS120 |
C | ILE121 |
C | ALA125 |
C | ARG141 |
C | GLU175 |
C | TYR227 |
C | VAL289 |
C | LYS291 |
C | LYS315 |
C | HOH425 |
C | HOH457 |
site_id | DC2 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE NAD D 404 |
Chain | Residue |
D | TYR25 |
D | TYR29 |
D | TYR30 |
D | VAL37 |
D | ASP39 |
D | TYR42 |
D | ASP43 |
D | TYR87 |
D | SER88 |
D | LEU89 |
D | ASP91 |
D | GLU118 |
D | LEU119 |
D | LYS120 |
D | ILE121 |
D | ALA125 |
D | ARG141 |
D | GLU175 |
D | TYR227 |
D | LYS291 |
D | LYS315 |
D | HOH534 |
D | HOH537 |
D | HOH545 |
Functional Information from PROSITE/UniProt
site_id | PS01055 |
Number of Residues | 30 |
Details | DNA_LIGASE_N1 NAD-dependent DNA ligase signature 1. KIDGLAislrYenGvFvrgaTRGDGtvGEN |
Chain | Residue | Details |
A | LYS120-ASN149 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | LYS120 | |
B | LYS120 | |
C | LYS120 | |
D | LYS120 | |
Chain | Residue | Details |
A | GLU175 | |
A | LYS291 | |
A | LYS315 | |
B | ASP39 | |
B | SER88 | |
B | GLU118 | |
B | ARG141 | |
B | GLU175 | |
B | LYS291 | |
B | LYS315 | |
C | ASP39 | |
C | SER88 | |
C | GLU118 | |
C | ARG141 | |
C | GLU175 | |
C | LYS291 | |
C | LYS315 | |
D | ASP39 | |
D | SER88 | |
D | GLU118 | |
D | ARG141 | |
D | GLU175 | |
D | LYS291 | |
D | LYS315 | |
A | ASP39 | |
A | SER88 | |
A | GLU118 | |
A | ARG141 | |