1SZW
Crystal structure of E. coli tRNA pseudouridine synthase TruD
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0001522 | biological_process | pseudouridine synthesis |
| A | 0003723 | molecular_function | RNA binding |
| A | 0005829 | cellular_component | cytosol |
| A | 0006396 | biological_process | RNA processing |
| A | 0008033 | biological_process | tRNA processing |
| A | 0009451 | biological_process | RNA modification |
| A | 0009982 | molecular_function | pseudouridine synthase activity |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0031119 | biological_process | tRNA pseudouridine synthesis |
| A | 0106029 | molecular_function | tRNA pseudouridine synthase activity |
| A | 0140098 | molecular_function | catalytic activity, acting on RNA |
| A | 0160150 | molecular_function | tRNA pseudouridine(13) synthase activity |
| B | 0001522 | biological_process | pseudouridine synthesis |
| B | 0003723 | molecular_function | RNA binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0006396 | biological_process | RNA processing |
| B | 0008033 | biological_process | tRNA processing |
| B | 0009451 | biological_process | RNA modification |
| B | 0009982 | molecular_function | pseudouridine synthase activity |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0031119 | biological_process | tRNA pseudouridine synthesis |
| B | 0106029 | molecular_function | tRNA pseudouridine synthase activity |
| B | 0140098 | molecular_function | catalytic activity, acting on RNA |
| B | 0160150 | molecular_function | tRNA pseudouridine(13) synthase activity |
Functional Information from PROSITE/UniProt
| site_id | PS01268 |
| Number of Residues | 14 |
| Details | UPF0024 Uncharacterized protein family UPF0024 signature. GqKDKhAVTeQwLC |
| Chain | Residue | Details |
| A | GLY77-CYS90 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 14 |
| Details | Region: {"description":"RNA binding","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"19664587","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
