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1S3G

Crystal structure of adenylate kinase from Bacillus globisporus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004017molecular_functionAMP kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0008270molecular_functionzinc ion binding
A0009165biological_processnucleotide biosynthetic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
A0019205molecular_functionnucleobase-containing compound kinase activity
A0044209biological_processAMP salvage
A0046872molecular_functionmetal ion binding
A0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 219
ChainResidue
ACYS130
ACYS133
ACYS150
AASP153

site_idAC2
Number of Residues34
DetailsBINDING SITE FOR RESIDUE AP5 A 218
ChainResidue
AGLY14
ATHR15
ATHR31
AGLY32
AARG36
AMET53
AALA57
ALEU58
AVAL59
ATHR64
AGLY85
APHE86
AARG88
AGLN92
AARG123
AARG127
ASER136
ATYR137
AHIS138
AASN142
AARG160
AARG171
ALYS199
AILE201
AHOH223
AHOH224
AHOH234
AHOH237
AHOH251
APRO9
AGLY10
AALA11
AGLY12
ALYS13

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. FLLDGFPRtvpQ
ChainResidueDetails
APHE81-GLN92

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues29
DetailsRegion: {"description":"NMP","evidences":[{"source":"HAMAP-Rule","id":"MF_00235","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"15100224","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues37
DetailsRegion: {"description":"LID","evidences":[{"source":"HAMAP-Rule","id":"MF_00235","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"15100224","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues22
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00235","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"15100224","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1zio
ChainResidueDetails
ALYS13
AARG127
AARG171
AARG160
AASP162
AASP163

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1zio
ChainResidueDetails
ALYS13
AASP166
AASP33
AARG127

239803

PDB entries from 2025-08-06

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