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1RPZ

T4 POLYNUCLEOTIDE KINASE BOUND TO 5'-TGCAC-3' SSDNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
A0016787molecular_functionhydrolase activity
A0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
A0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
A0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA A 700
ChainResidue
AASP165
AASP167
AASP278

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 800
ChainResidue
AGLU108
AHIS109
AARG226
ALYS230

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 801
ChainResidue
AVAL107
AARG229
AGLU97
ALYS106

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE ADP A 900
ChainResidue
AGLY12
ASER13
AGLY14
ALYS15
ASER16
ATHR17
AGLU45
AARG126
ALYS129

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
ALYS15electrostatic stabiliser
AASP35proton shuttle (general acid/base)
AARG126electrostatic stabiliser
AASP165covalent catalysis

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PDB entries from 2024-04-24

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