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1RMY

Crystal structure of AphA class B acid phosphatase/phosphotransferase ternary complex with deoxycytosine and phosphate bound to the catalytic metal

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003993molecular_functionacid phosphatase activity
A0016787molecular_functionhydrolase activity
A0030288cellular_componentouter membrane-bounded periplasmic space
A0036424molecular_functionL-phosphoserine phosphatase activity
A0042597cellular_componentperiplasmic space
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0003993molecular_functionacid phosphatase activity
B0016787molecular_functionhydrolase activity
B0030288cellular_componentouter membrane-bounded periplasmic space
B0036424molecular_functionL-phosphoserine phosphatase activity
B0042597cellular_componentperiplasmic space
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 813
ChainResidue
AASP44
AASP46
AASP167
AHOH995
AHOH1195
AHOH1204

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 814
ChainResidue
BPO4800
BHOH1190
BHOH1209
BASP44
BASP46
BASP167

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 B 800
ChainResidue
BASP44
BILE45
BASP46
BTHR112
BGLY113
BLYS152
BDCZ801
BMG814
BHOH991
BHOH1190
BHOH1209

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DCZ B 801
ChainResidue
BASP46
BPHE56
BTYR70
BGLY113
BTHR192
BTYR193
BPO4800
BHOH820
BHOH843
BHOH903
BHOH953
BHOH997

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE DCZ A 807
ChainResidue
AASP46
APHE56
ATYR70
ATRP77
AGLY113
AARG114
ATHR192
ATYR193
AHOH913
AHOH992
AHOH1001
AHOH1006
AHOH1196

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile
ChainResidueDetails
AASP44
BASP44

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton donor
ChainResidueDetails
AASP46
BASP46

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING:
ChainResidueDetails
AASP44
BASP167
AASP46
ATHR112
ALYS152
AASP167
BASP44
BASP46
BTHR112
BLYS152

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PDB entries from 2024-07-24

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