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1R1Z

The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0016020cellular_componentmembrane
C0016020cellular_componentmembrane
D0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 285
ChainResidue
AASP160
APHE162
AASN164
AASP189
AHOH303
AHOH308

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 286
ChainResidue
AASN170
AASP189
AHOH297
AHOH329
AASP163
AASP165
AASN169

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 310
ChainResidue
BASP160
BPHE162
BASN164
BASP189
BHOH332
BHOH341

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA B 315
ChainResidue
BASP163
BASP165
BASN169
BASN170
BASP189

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA C 410
ChainResidue
CASP160
CPHE162
CASN164
CASP189
CHOH426

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 415
ChainResidue
CASP163
CASP165
CASN169
CASN170
CASP189
CHOH429

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA D 510
ChainResidue
DASP160
DPHE162
DASN164
DASP189
DHOH518

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA D 515
ChainResidue
DASP163
DASP165
DASN169
DASN170
DASP189
DHOH529

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00658
ChainResidueDetails
ASER96
CALA132
CASP189
CALA262
DGLY99
DALA132
DASP189
DALA262
AASP129
AHIS186
AGLY259
BGLY99
BALA132
BASP189
BALA262
CGLY99

site_idSWS_FT_FI2
Number of Residues32
DetailsBINDING:
ChainResidueDetails
AASP160
BASP165
BGLY166
BLYS167
BLYS168
BALA172
BILE173
BTHR192
CASP163
CASP165
CGLY166
APHE162
CLYS167
CLYS168
CALA172
CILE173
CTHR192
DASP163
DASP165
DGLY166
DLYS167
DLYS168
AASP163
DALA172
DILE173
DTHR192
AASN164
AASP165
AASN169
AASN170
AASP189
BASP163

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PDB entries from 2024-07-17

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